RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MPOP05164 745 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 CKMT1AP12532 417 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 GM2AP17900 193 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 IL4RP24394 825 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 SSR1P43307 286 aaKnown RBP25.44■■□□□ 1.66
NME3-202ENST00000561637 THOP1P52888 689 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 ELP6Q0PNE2 266 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 CFAP58Q5T655 872 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 BRAT1Q6PJG6 821 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 PHACTR4Q8IZ21 702 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 PLA2G15Q8NCC3 412 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 ZNF564Q8TBZ8 553 aaPredicted RBP25.44■■□□□ 1.66
NME3-202ENST00000561637 HCAR2Q8TDS4 363 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 TEKT4Q8WW24 435 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 LRRC61Q9BV99 259 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 TRAFD1O14545 582 aaPredicted RBP25.43■■□□□ 1.66
NME3-202ENST00000561637 MAFKO60675 156 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 PCCBP05166 539 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 SERPINA4P29622 427 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 ARSEP51690 589 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 ZNF135P52742 658 aaPredicted RBP25.43■■□□□ 1.66
NME3-202ENST00000561637 CDH6P55285 790 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 PCBP4P57723 403 aaKnown RBP25.43■■□□□ 1.66
NME3-202ENST00000561637 TAS2R40P59535 323 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 MAXP61244 160 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 RHDQ02161 417 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 BCL2L1Q07817 233 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 LRRC14Q15048 493 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 PTPRRQ15256 657 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 PELI3Q8N2H9 469 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 LRRN4Q8WUT4 740 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 FUBP1Q96AE4 644 aaKnown RBP25.43■■□□□ 1.66
NME3-202ENST00000561637 WBP1Q96G27 269 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 PSKH2Q96QS6 385 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 CLPBQ9H078 707 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 SEPT3Q9UH03 358 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 APOBEC3BQ9UH17 382 aaKnown RBP25.43■■□□□ 1.66
NME3-202ENST00000561637 OR1A2Q9Y585 309 aa25.43■■□□□ 1.66
NME3-202ENST00000561637 HECTD1Q9ULT8 2610 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 H3BM21 787 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 MAP3K6O95382 1288 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 HNRNPH3P31942 346 aaKnown RBP25.42■■□□□ 1.66
NME3-202ENST00000561637 SUOXP51687 545 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 TMPRSS3P57727 454 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 E2F1Q01094 437 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 KRT81Q14533 505 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 RFTN1Q14699 578 aaPredicted RBP25.42■■□□□ 1.66
NME3-202ENST00000561637 GRM3Q14832 879 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 PRRT3Q5FWE3 981 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 ERAP2Q6P179 960 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 MACC1Q6ZN28 852 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 LZTR1Q8N653 840 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 FAM181AQ8N9Y4 354 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 RNF214Q8ND24 703 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 IQCDQ96DY2 449 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 ZNF578Q96N58 590 aaPredicted RBP25.42■■□□□ 1.66
NME3-202ENST00000561637 PCDHGC4Q9Y5F7 938 aa25.42■■□□□ 1.66
NME3-202ENST00000561637 RP1P56715 2156 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 MFSD11O43934 449 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 LZTS3O60299 673 aaPredicted RBP25.41■■□□□ 1.66
NME3-202ENST00000561637 ALPPL2P10696 532 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 CR2P20023 1033 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 NSUN2Q08J23 767 aaKnown RBP eCLIP25.41■■□□□ 1.66
NME3-202ENST00000561637 ZNF235Q14590 738 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 INPP5AQ14642 412 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 CDKN3Q16667 212 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 ASTE1Q2TB18 679 aaPredicted RBP25.41■■□□□ 1.66
NME3-202ENST00000561637 GUSBP11Q6P575 273 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 TSACCQ96A04 125 aaPredicted RBP25.41■■□□□ 1.66
NME3-202ENST00000561637 C1QTNF7Q9BXJ2 289 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 NOD2Q9HC29 1040 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 CTTNBP2NLQ9P2B4 639 aa25.41■■□□□ 1.66
NME3-202ENST00000561637 COL27A1Q8IZC6 1860 aaPredicted RBP25.4■■□□□ 1.66
NME3-202ENST00000561637 NEMP2A6NFY4 417 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 MYO1FO00160 1098 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 OPA1O60313 960 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 ADKP55263 362 aaKnown RBP25.4■■□□□ 1.66
NME3-202ENST00000561637 AP1S1P61966 158 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 YPEL5P62699 121 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 TRAF2Q12933 501 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 ALG11Q2TAA5 492 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 HS1BP3Q53T59 392 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 FAM182AQ5T1J6 154 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 FAXCQ5TGI0 409 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 CDCP2Q5VXM1 449 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 CRTC1Q6UUV9 634 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 LIPIQ6XZB0 460 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 ATPAF2Q8N5M1 289 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 PAF1Q8N7H5 531 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 TTC9Q92623 222 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 ZNF599Q96NL3 588 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 SMIM14Q96QK8 99 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 B4GALT6Q9UBX8 382 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.4■■□□□ 1.664e-11■■□□□ 14.2
NME3-202ENST00000561637 CSNK1G3Q9Y6M4 447 aa25.4■■□□□ 1.66
NME3-202ENST00000561637 LRP4O75096 1905 aa25.39■■□□□ 1.66
NME3-202ENST00000561637 A0A0U1RQS6 177 aa25.39■■□□□ 1.66
NME3-202ENST00000561637 TMEM110-MUSTN1A8MSY1 372 aa25.39■■□□□ 1.66
NME3-202ENST00000561637 B8ZZF3 427 aa25.39■■□□□ 1.66
NME3-202ENST00000561637 RECQL5O94762 991 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms