RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SMIM14Q96QK8 99 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.78
HERC1-212ENST00000561348 ELF4Q99607 663 aaPredicted RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 TSGA10Q9BZW7 698 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 CAAP1Q9H8G2 361 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 MBNL1Q9NR56 388 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 UBP1Q9NZI7 540 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 KLHL8Q9P2G9 620 aaPredicted RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 B4GALT6Q9UBX8 382 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 MOSPD1Q9UJG1 213 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 ADGRG1Q9Y653 693 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 LAMA1P25391 3075 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 SPTBN2O15020 2390 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 MED19A0JLT2 244 aaPredicted RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 BTNL10A8MVZ5 291 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 FFAR2O15552 330 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PMPCBO75439 489 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PGLSO95336 258 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PDHA1P08559 390 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PYGMP11217 842 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 CYP2A6P11509 494 aaPredicted RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 CA4P22748 312 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 NR2C2P49116 596 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 SUOXP51687 545 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 NIPAL4Q0D2K0 466 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 FOXC1Q12948 553 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 GALNT3Q14435 633 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 IRF4Q15306 451 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 TMEM52BQ4KMG9 183 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 N4BP2L1Q5TBK1 243 aaPredicted RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 DARS2Q6PI48 645 aaKnown RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 USP45Q70EL2 814 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PID1Q7Z2X4 250 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 NT5DC3Q86UY8 548 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 TEX26Q8N6G2 289 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 EID2Q8N6I1 236 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 HCAR2Q8TDS4 363 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 VOPP1Q96AW1 172 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 IFT43Q96FT9 208 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 CALR3Q96L12 384 aaKnown RBP10.17□□□□□ -0.78
HERC1-212ENST00000561348 BMFQ96LC9 184 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 OSBPL8Q9BZF1 889 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 CD84Q9UIB8 345 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 PHTF1Q9UMS5 762 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 BTBD3Q9Y2F9 522 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 OR1A2Q9Y585 309 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 CAPN6Q9Y6Q1 641 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 CACNA1EQ15878 2313 aa10.17□□□□□ -0.78
HERC1-212ENST00000561348 A0A1B0GTQ1 180 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TSPAN11A1L157 253 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 GOLGA6L9A6NEM1 432 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 ZNF487B1APH4 448 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TRAFD1O14545 582 aaPredicted RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 SOCS5O75159 536 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 RECQL5O94762 991 aaPredicted RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 TJP3O95049 919 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 PIRTP0C851 137 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 CR2P20023 1033 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 VIPR1P32241 457 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 IGFALSP35858 605 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 MMP12P39900 470 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 RABIFP47224 123 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 EIF3EP60228 445 aaKnown RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 OTUD4Q01804 1114 aaKnown RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 INPP5AQ14642 412 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TRIP6Q15654 476 aaKnown RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 ZNF423Q2M1K9 1284 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 INAVAQ3KP66 663 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 FAXCQ5TGI0 409 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 CCDC70Q6NSX1 233 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 LIPIQ6XZB0 460 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 ERMP1Q7Z2K6 904 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TSPAN33Q86UF1 283 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TAB3Q8N5C8 712 aaPredicted RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 PNPLA1Q8N8W4 532 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 LRRC57Q8N9N7 239 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 TMEM145Q8NBT3 493 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 SPATA22Q8NHS9 363 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 ACTL9Q8TC94 416 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 MAML1Q92585 1016 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 ALG3Q92685 438 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 ALS2CR12Q96Q35 445 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 FERMT1Q9BQL6 677 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 PCDH9Q9HC56 1237 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 HS3ST3A1Q9Y663 406 aa10.16□□□□□ -0.78
HERC1-212ENST00000561348 CNOT1A5YKK6 2376 aaKnown RBP10.16□□□□□ -0.78
HERC1-212ENST00000561348 A0A1W2PQ67 120 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 NPIPB15A6NHN6 443 aaPredicted RBP10.15□□□□□ -0.78
HERC1-212ENST00000561348 MIF4GDA9UHW6 222 aaKnown RBP10.15□□□□□ -0.78
HERC1-212ENST00000561348 TM4SF5O14894 197 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 KCNN4O15554 427 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 FLRT2O43155 660 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 DFNA5O60443 496 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 MT-CYBP00156 380 aaPredicted RBP10.15□□□□□ -0.78
HERC1-212ENST00000561348 CEACAM1P13688 526 aa10.15□□□□□ -0.78
HERC1-212ENST00000561348 NFKB1P19838 968 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms