RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 LIPIQ6XZB0 460 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 Q6ZSR6 202 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 ZC3H18Q86VM9 953 aaKnown RBP12.15□□□□□ -0.46
USP8-212ENST00000560730 SLC22A18ASQ8N1D0 253 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
USP8-212ENST00000560730 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
USP8-212ENST00000560730 PIH1D2Q8WWB5 315 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 P3H4Q92791 437 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 AGAP3Q96P47 875 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
USP8-212ENST00000560730 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 BRD8Q9H0E9 1235 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 GDF3Q9NR23 364 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 B4GALT6Q9UBX8 382 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 CHKBQ9Y259 395 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
USP8-212ENST00000560730 GOLGA4Q13439 2230 aaKnown RBP12.15□□□□□ -0.47
USP8-212ENST00000560730 DNAH14Q0VDD8 3507 aa12.15□□□□□ -0.47
USP8-212ENST00000560730 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
USP8-212ENST00000560730 ALPIP09923 528 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 CTPS1P17812 591 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 CSRP1P21291 193 aaKnown RBP12.14□□□□□ -0.47
USP8-212ENST00000560730 CES1P23141 567 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 PTPN3P26045 913 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 PTPN7P35236 360 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 CD86P42081 329 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 NOVA1P51513 510 aaKnown RBP12.14□□□□□ -0.47
USP8-212ENST00000560730 SKOR1P84550 965 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 WASHC5Q12768 1159 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 OVGP1Q12889 678 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 BNIP3Q12983 259 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 ARMC12Q5T9G4 340 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 PTAR1Q7Z6K3 402 aaPredicted RBP12.14□□□□□ -0.47
USP8-212ENST00000560730 ZSCAN30Q86W11 494 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 GATAD2AQ86YP4 633 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 TFB1MQ8WVM0 346 aaKnown RBP12.14□□□□□ -0.47
USP8-212ENST00000560730 HES6Q96HZ4 224 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 PHTF1Q9UMS5 762 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 NCOR2Q9Y618 2525 aa12.14□□□□□ -0.47
USP8-212ENST00000560730 NPIPB15A6NHN6 443 aaPredicted RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 A6NNZ2 444 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 FPGTO14772 594 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 KRT86O43790 486 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 LZTS3O60299 673 aaPredicted RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 PCDHGA12O60330 932 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 LHCGRP22888 699 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 VIPR1P32241 457 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 CD68P34810 354 aaPredicted RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 CCT8P50990 548 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 NOMO1Q15155 1222 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 IRF4Q15306 451 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 TEX44Q53QW1 395 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 ZNF542PQ5EBM4 170 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 KYAT3Q6YP21 454 aaKnown RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 TSPAN33Q86UF1 283 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 CBARPQ8N350 705 aaPredicted RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 DENND6BQ8NEG7 585 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 ACTL9Q8TC94 416 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 SCRN2Q96FV2 425 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 QKIQ96PU8 341 aaKnown RBP eCLIP12.13□□□□□ -0.474e-6■■■□□ 18.9
USP8-212ENST00000560730 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP8-212ENST00000560730 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
USP8-212ENST00000560730 TSGA10Q9BZW7 698 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 ERVMER34-1Q9H9K5 563 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 EFR3BQ9Y2G0 817 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 PPIL1Q9Y3C6 166 aa12.13□□□□□ -0.47
USP8-212ENST00000560730 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 A0A1W2PQ67 120 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 MIF4GDA9UHW6 222 aaKnown RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 APOC4-APOC2K7ER74 178 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 DFNA5O60443 496 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 MAGEC1O60732 1142 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 CBFA2T3O75081 653 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 RECQL5O94762 991 aaPredicted RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 APOC2P02655 101 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 CCDC175P0C221 793 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 ELFN1P0C7U0 828 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 CEACAM1P13688 526 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 HNF1BP35680 557 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 RXRGP48443 463 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PFN3P60673 137 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 FZD2Q14332 565 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 LRRC14Q15048 493 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 AGERQ15109 404 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 CNGA3Q16281 694 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 N4BP2L1Q5TBK1 243 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms