RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CRTAMO95727 393 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 S1PR4O95977 384 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 COX4I1P13073 169 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 TFEBP19484 476 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 PPARGP37231 505 aaPredicted RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 PTDSS1P48651 473 aaKnown RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 NAGLUP54802 743 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 INHBCP55103 352 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 XIAPP98170 497 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 DSC2Q02487 901 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 GNA12Q03113 381 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 ITKQ08881 620 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 UBAP2LQ14157 1087 aaKnown RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 TAF11Q15544 211 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 MAPRE2Q15555 327 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 TYSND1Q2T9J0 566 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 ACCSLQ4AC99 568 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 RTP2Q5QGT7 225 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 HECTD3Q5T447 861 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 HECTD2Q5U5R9 776 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 SDHAF4Q5VUM1 108 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 NADSYN1Q6IA69 706 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 SDCCAG8Q86SQ7 713 aaPredicted RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 MIB1Q86YT6 1006 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 CEP97Q8IW35 865 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 PGBD5Q8N414 524 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 GPATCH11Q8N954 259 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 ACVR1CQ8NER5 493 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 RHEBL1Q8TAI7 183 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 HEXDCQ8WVB3 486 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 NXNL1Q96CM4 212 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 L3HYPDHQ96EM0 354 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 NAF1Q96HR8 494 aaKnown RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 SERPINI1Q99574 410 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 SEMA3CQ99985 751 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 THTPAQ9BU02 230 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 IGSF5Q9NSI5 407 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
RTF1-206ENST00000560447 TRPM5Q9NZQ8 1165 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 UBA2Q9UBT2 640 aaPredicted RBP9.75□□□□□ -0.85
RTF1-206ENST00000560447 STK39Q9UEW8 545 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 SLC2A6Q9UGQ3 507 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 SLC7A8Q9UHI5 535 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 STOML2Q9UJZ1 356 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 COMMD10Q9Y6G5 202 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 ANAPC1Q9H1A4 1944 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 LTBP2Q14767 1821 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 A0A088AWK7 358 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CXorf51AA0A1B0GTR3 108 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 A0A1B0GVM2 712 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 TCAF2A6NFQ2 919 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 TBKBP1A7MCY6 615 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 GOLGA8TH3BQL2 631 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 NVLO15381 856 aaKnown RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 GRID2O43424 1007 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 AOC2O75106 756 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 IPO13O94829 963 aaKnown RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 GLP2RO95838 553 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 HSPA1AP0DMV8 641 aaKnown RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 HSPA1BP0DMV9 641 aaKnown RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 ATF6P18850 670 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 NCF2P19878 526 aaPredicted RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 FDXRP22570 491 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 HOXD9P28356 352 aaPredicted RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 RFC2P35250 354 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CHRNA4P43681 627 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 ATP4BP51164 291 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 OXCT1P55809 520 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 RPL26P61254 145 aaKnown RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 DLG1Q12959 904 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CDC16Q13042 620 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 USP4Q13107 963 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 DUSP4Q13115 394 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 RCN1Q15293 331 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 PCSK7Q16549 785 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 SLC9B1Q4ZJI4 515 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CNSTQ6PJW8 725 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 RSPO2Q6UXX9 243 aaPredicted RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 ATG14Q6ZNE5 492 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 LRRC74BQ6ZQY2 392 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 HERC6Q8IVU3 1022 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 MFSD6LQ8IWD5 586 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 LGI2Q8N0V4 545 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 LSMEM2Q8N112 164 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 SLC25A41Q8N5S1 370 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 TTC9BQ8N6N2 239 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 KDM1BQ8NB78 822 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CEP70Q8NHQ1 597 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 DNAJC9Q8WXX5 260 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 TRIB3Q96RU7 358 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 HERC2P3Q9BVR0 1158 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 VCX3BQ9H321 246 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CCSER2Q9H7U1 834 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 SYTL2Q9HCH5 934 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 NLE1Q9NVX2 485 aaPredicted RBP9.74□□□□□ -0.85
RTF1-206ENST00000560447 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 CPSF2Q9P2I0 782 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms