RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 MARC1Q5VT66 337 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 CDCP2Q5VXM1 449 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 KDM7AQ6ZMT4 941 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 RBM44Q6ZP01 1051 aaKnown RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 CYP4V2Q6ZWL3 525 aaPredicted RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 USP45Q70EL2 814 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 EFL1Q7Z2Z2 1120 aaKnown RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 NPWQ8N729 165 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 ARL10Q8N8L6 244 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 ZNF578Q96N58 590 aaPredicted RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 APOOQ9BUR5 198 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 LRRC61Q9BV99 259 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 BOCQ9BWV1 1114 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 THAP2Q9H0W7 228 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 AMACRQ9UHK6 382 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 CACNA1GO43497 2377 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 PSMD11O00231 422 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 TNFRSF10CO14798 259 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 CSO75390 466 aaKnown RBP14.15□□□□□ -0.14
TPM1-223ENST00000560445 TNFP01375 233 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 PCCBP05166 539 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 H2AFZP0C0S5 128 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 RARAP10276 462 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 MX2P20592 715 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 MMP13P45452 471 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
TPM1-223ENST00000560445 SRP54P61011 504 aaKnown RBP14.15□□□□□ -0.14
TPM1-223ENST00000560445 ARHGEF7Q14155 803 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 INPP5AQ14642 412 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 PDK2Q15119 407 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 CDKN3Q16667 212 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 H2AFVQ71UI9 128 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 HID1Q8IV36 788 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 ZNF564Q8TBZ8 553 aaPredicted RBP14.15□□□□□ -0.14
TPM1-223ENST00000560445 CPLX3Q8WVH0 158 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 VOPP1Q96AW1 172 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
TPM1-223ENST00000560445 MGME1Q9BQP7 344 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 TRIM7Q9C029 511 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 WDR26Q9H7D7 661 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 PCDH18Q9HCL0 1135 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 THSD1Q9NS62 852 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 IFNKQ9P0W0 207 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 CTTNBP2NLQ9P2B4 639 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 DGKBQ9Y6T7 804 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 ANKRD36A6QL64 1941 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 ADAMTS20P59510 1910 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 MYLKQ15746 1914 aa14.15□□□□□ -0.14
TPM1-223ENST00000560445 A0A087X0T9 212 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 BRINP1O60477 761 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 BUB1BO60566 1050 aaPredicted RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 DXOO77932 396 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 RECQL5O94762 991 aaPredicted RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 PYGLP06737 847 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 FAM228BP0C875 321 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 TSHRP16473 764 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 RBMS1P29558 406 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 HNRNPH3P31942 346 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 VIPR1P32241 457 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 LSSP48449 732 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 UCNP55089 124 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 PCBP4P57723 403 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 ERVPABLB-1P60509 514 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 SLC10A7Q0GE19 358 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 ACOX1Q15067 660 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 COL28A1Q2UY09 1125 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 TBC1D25Q3MII6 688 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 BROXQ5VW32 411 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 SPECC1LQ69YQ0 1117 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 ENPP7Q6UWV6 458 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 MARCH9Q86YJ5 346 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 RBFAQ8N0V3 343 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 ZNF248Q8NDW4 579 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 OR56A4Q8NGH8 313 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 HNRNPLLQ8WVV9 542 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 FATE1Q969F0 183 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 CCDC97Q96F63 343 aaPredicted RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 ZNF670Q9BS34 389 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 POLR1EQ9GZS1 481 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 POLR1BQ9H9Y6 1135 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 MBNL1Q9NR56 388 aaKnown RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 PHPT1Q9NRX4 125 aaPredicted RBP14.14□□□□□ -0.15
TPM1-223ENST00000560445 PADI4Q9UM07 663 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 PHTF1Q9UMS5 762 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 SPEGQ15772 3267 aa14.14□□□□□ -0.15
TPM1-223ENST00000560445 EIF4E1BA6NMX2 242 aaKnown RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 TRAFD1O14545 582 aaPredicted RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 MUSKO15146 869 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 YY2O15391 372 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 HTRA2O43464 458 aaPredicted RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 USP12O75317 370 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 GYPCP04921 128 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 AMPD1P23109 780 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 IL1R2P27930 398 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 MAN1A1P33908 653 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 EIF2S3P41091 472 aaKnown RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 GABREP78334 506 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms