RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 SUOXP51687 545 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 MAXP61244 160 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 EIF2B5Q13144 721 aaKnown RBP14.8□□□□□ -0.04
IDH3A-219ENST00000560414 TBX2Q13207 712 aaPredicted RBP14.8□□□□□ -0.04
IDH3A-219ENST00000560414 MESDQ14696 234 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 IRF4Q15306 451 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 WSCD2Q2TBF2 565 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 ERAP2Q6P179 960 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 KDF1Q8NAX2 398 aaPredicted RBP14.8□□□□□ -0.04
IDH3A-219ENST00000560414 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 SLC35G2Q8TBE7 412 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 ECHDC3Q96DC8 303 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 TRIM5Q9C035 493 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 RCOR3Q9P2K3 495 aaPredicted RBP14.8□□□□□ -0.04
IDH3A-219ENST00000560414 ZMIZ1Q9ULJ6 1067 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 ATP8A1Q9Y2Q0 1164 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 PCDHGC4Q9Y5F7 938 aa14.8□□□□□ -0.04
IDH3A-219ENST00000560414 A8MX80 341 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 AKR1B15C9JRZ8 316 aaPredicted RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 RFPL3O75679 317 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 CSF2P04141 144 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 MYF5P13349 255 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 CR2P20023 1033 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 MMP12P39900 470 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 AP1S1P61966 158 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 HNRNPKP61978 463 aaKnown RBP eCLIP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 ZNF211Q13398 564 aaPredicted RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 SMAD1Q15797 465 aaKnown RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 ANKRD20A8PQ5CZ79 823 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 NCBP2-AS2Q69YL0 99 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 PARGQ86W56 976 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 OR4C6Q8NH72 309 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 C1QTNF7Q9BXJ2 289 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 TCEAL2Q9H3H9 227 aaPredicted RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 NOD2Q9HC29 1040 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 PNMA8BQ9ULN7 279 aaPredicted RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 PCDHGA1Q9Y5H4 931 aa14.79□□□□□ -0.04
IDH3A-219ENST00000560414 KMT2BQ9UMN6 2715 aaPredicted RBP14.79□□□□□ -0.04
IDH3A-219ENST00000560414 KNTC1P50748 2209 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 ANKRD36A6QL64 1941 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 FREM2Q5SZK8 3169 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 LZTS3O60299 673 aaPredicted RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 NME1P15531 152 aaKnown RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 CKMT2P17540 419 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 MMP13P45452 471 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 THOP1P52888 689 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 RALGDSQ12967 914 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 LRRC14Q15048 493 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 PAFAH1B3Q15102 231 aaKnown RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 PDK2Q15119 407 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 ZFYVE27Q5T4F4 411 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 SARM1Q6SZW1 724 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 CNGA4Q8IV77 575 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 RBFAQ8N0V3 343 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 GALNT15Q8N3T1 639 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 ZNF548Q8NEK5 533 aaPredicted RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 PDCD6IPQ8WUM4 868 aaKnown RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 NSMCE1Q8WV22 266 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 ZCCHC14Q8WYQ9 949 aaKnown RBP14.78□□□□□ -0.04
IDH3A-219ENST00000560414 RAPGEF5Q92565 580 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 NUDCD1Q96RS6 583 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 MGME1Q9BQP7 344 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 ZNF670Q9BS34 389 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 NT5MQ9NPB1 228 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 LRRK1Q38SD2 2015 aa14.78□□□□□ -0.04
IDH3A-219ENST00000560414 SHROOM3Q8TF72 1996 aa14.77□□□□□ -0.04
IDH3A-219ENST00000560414 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.77□□□□□ -0.05
IDH3A-219ENST00000560414 TMEM8BA6NDV4 472 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 K7ESM1 405 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 SCAMP1O15126 338 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 KRT7P08729 469 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 C1SP09871 688 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 MAN1A1P33908 653 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 HSPA9P38646 679 aaKnown RBP14.77□□□□□ -0.05
IDH3A-219ENST00000560414 GARSP41250 739 aaKnown RBP14.77□□□□□ -0.05
IDH3A-219ENST00000560414 YPEL5P62699 121 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 POLR2LP62875 67 aaKnown RBP14.77□□□□□ -0.05
IDH3A-219ENST00000560414 DAB2P98082 770 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 GBE1Q04446 702 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 GALNT2Q10471 571 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 TRAF2Q12933 501 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 C1orf61Q13536 156 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 PTK2BQ14289 1009 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 INPP5AQ14642 412 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 HS1BP3Q53T59 392 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 LIPIQ6XZB0 460 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 MAP7D3Q8IWC1 876 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 BBS5Q8N3I7 341 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.77□□□□□ -0.05
IDH3A-219ENST00000560414 PQLC3Q8N755 202 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 LMX1AQ8TE12 382 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 OR1A2Q9Y585 309 aa14.77□□□□□ -0.05
IDH3A-219ENST00000560414 DMXL2Q8TDJ6 3036 aa14.76□□□□□ -0.05
IDH3A-219ENST00000560414 NEMP2A6NFY4 417 aa14.76□□□□□ -0.05
IDH3A-219ENST00000560414 H3BM21 787 aa14.76□□□□□ -0.05
IDH3A-219ENST00000560414 AQP9O43315 295 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms