RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ACMSDQ8TDX5 336 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ANKZF1Q9H8Y5 726 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 TBC1D30Q9Y2I9 924 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 PEX10O60683 326 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ATG13O75143 517 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 PEX11AO75192 247 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 RASGRP1O95267 797 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 R3HCC1LQ7Z5L2 792 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 LYVE1Q9Y5Y7 322 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 GPR25O00155 361 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 VIPP01282 170 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 INTS6LQ5JSJ4 861 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CHSY3Q70JA7 882 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 H3BNH8 94 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 MTAPQ13126 283 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ZDHHC20Q5W0Z9 365 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ATXN2LQ8WWM7 1075 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 REXO5Q96IC2 774 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PRMT3O60678 531 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 FAM20BO75063 409 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 CDK14O94921 469 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PRNPP04156 253 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 CYP3A5P20815 502 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ADRM1Q16186 407 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 TXNDC11Q6PKC3 985 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 CDYL2Q8N8U2 506 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 C19orf18Q8NEA5 215 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 KLHL18O94889 574 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PROCP04070 461 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 C8AP07357 584 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ZCCHC18P0CG32 403 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 TSPAN8P19075 237 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 CHST9Q7L1S5 443 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 C17orf64Q86WR6 236 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 RNASE11Q8TAA1 199 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PCED1BQ96HM7 432 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 SLITRK2Q9H156 845 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 OR6B1O95007 311 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 ATP6V0D1P61421 351 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 INAQ16352 499 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 DGKKQ5KSL6 1271 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 E9PAM4 449 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 KRT75O95678 551 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 FNBP1LQ5T0N5 605 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 NEUROD4Q9HD90 331 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 COQ6Q9Y2Z9 468 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 H3BM21 787 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 SLC28A1O00337 649 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PAPSS1O43252 624 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 TEX44Q53QW1 395 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 NETO2Q8NC67 525 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 SETD9Q8NE22 299 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 BTBD10Q9BSF8 475 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 WRAP53Q9BUR4 548 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PCDH18Q9HCL0 1135 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
TRAF3-208ENST00000560371 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
TRAF3-208ENST00000560371 MDM4O15151 490 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PSMB9P28065 219 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ARL2P36404 184 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 YBEYP58557 167 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ARMCX4Q5H9R4 360 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 GCNT7Q6ZNI0 430 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 CORO2BQ9UQ03 480 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 NCANO14594 1321 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 A0A1B0GVM2 712 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 TCAF2A6NFQ2 919 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 CCNDBP1O95273 360 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 CSNK2BP67870 215 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 IRF2BP2Q7Z5L9 587 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 KLHL1Q9NR64 748 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 RPS6KA6Q9UK32 745 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PTGES3LE9PB15 166 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 AP5Z1O43299 807 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 CLPTM1O96005 669 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ALADP13716 330 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 MARCKSL1P49006 195 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF280AP59817 542 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms