RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	UROC1	Q96N76	676 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SERPINB11	Q96P15	392 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	NPAS2	Q99743	824 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SPATA16	Q9BXB7	569 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	VN1R3	Q9BXE9	311 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ZYG11B	Q9C0D3	744 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SLC25A51	Q9H1U9	297 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MMADHC	Q9H3L0	296 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SP110	Q9HB58	689 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ENTPD7	Q9NQZ7	604 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PDP2	Q9P2J9	529 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CDH22	Q9UJ99	828 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PCDHGB4	Q9UN71	923 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SSX2IP	Q9Y2D8	614 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PCDHB5	Q9Y5E4	795 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PCDHGB5	Q9Y5G0	923 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SPO11	Q9Y5K1	396 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	hCG_2014768	A0A024R1R8	64 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369		A8MT66	165 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	INPPL1	O15357	1258 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TSPAN3	O60637	253 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CIB2	O75838	187 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	KLHL2	O95198	593 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SIX3	O95343	332 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	S1PR4	O95977	384 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	KLKB1	P03952	638 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CST5	P28325	142 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	OR1E1	P30953	314 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CYP2C18	P33260	490 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CD151	P48509	253 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SERPINH1	P50454	418 aa	Known RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CDK7	P50613	346 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	RPL14	P50914	215 aa	Known RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CDH13	P55290	713 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	MS4A2	Q01362	244 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SP3	Q02447	781 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SULT2A1	Q06520	285 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TBL3	Q12788	808 aa	Known RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	POLD3	Q15054	466 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TECRL	Q5HYJ1	363 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SH2D4B	Q5SQS7	431 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	MAP3K21	Q5TCX8	1036 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	GK5	Q6ZS86	529 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TRIM67	Q6ZTA4	783 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	C16orf59	Q7L2K0	433 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	BEND5	Q7L4P6	421 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SATL1	Q86VE3	508 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	LGI2	Q8N0V4	545 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	RYBP	Q8N488	228 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TTC16	Q8NEE8	873 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SLC26A7	Q8TE54	656 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	NMD3	Q96D46	503 aa	Known RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	C8orf48	Q96LL4	319 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	C1orf74	Q96LT6	269 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	FAM193B	Q96PV7	902 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	ILKAP	Q9H0C8	392 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	ZNF385D	Q9H6B1	395 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	ALG9	Q9H6U8	611 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TMEM248	Q9NWD8	314 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	GTSE1	Q9NYZ3	720 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	POMP	Q9Y244	141 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	RAP2C	Q9Y3L5	183 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CDY1	Q9Y6F8	540 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	NUP214	P35658	2090 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	DENND4C	Q5VZ89	1909 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	IGLV3-10	A0A075B6K4	115 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CCDC162P	A2VCL2	907 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	MROH6	A6NGR9	719 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	WASH4P	A8MWX3	477 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TMEM114	B3SHH9	223 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369		H3BMM5	538 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369		H3BNX3	289 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	NRG2	O14511	850 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SDHD	O14521	159 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TXNDC9	O14530	226 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	HDAC3	O15379	428 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CFLAR	O15519	480 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TLR5	O60602	858 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CABYR	O75952	493 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	PGM3	O95394	542 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SEC24A	O95486	1093 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	EOMES	O95936	686 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	IRF1	P10914	325 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	RHOQ	P17081	205 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	XRCC1	P18887	633 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	TCN1	P20061	433 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	NUDT2	P50583	147 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	THOP1	P52888	689 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	AQP4	P55087	323 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	CCL23	P55773	120 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	AP2B1	P63010	937 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	HTRA3	P83110	453 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	BTK	Q06187	659 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	SERINC3	Q13530	473 aa		5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	HNRNPD	Q14103	355 aa	Known RBP	5.79	□□□□□ -1.48
LRRC49-223	ENST00000560369	DBN1	Q16643	649 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms