RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 VPS41P49754 854 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 RPS21P63220 83 aaKnown RBP12.32□□□□□ -0.44
USP8-209ENST00000560297 SARNPP82979 210 aaKnown RBP12.32□□□□□ -0.44
USP8-209ENST00000560297 QPCTQ16769 361 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 TMEM52BQ4KMG9 183 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
USP8-209ENST00000560297 FAXCQ5TGI0 409 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 KIAA1161Q6NSJ0 714 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 DPPA4Q7L190 304 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 FOXJ1Q92949 421 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 TBL1YQ9BQ87 522 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 FICDQ9BVA6 458 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 GPR174Q9BXC1 333 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 TRABDQ9H4I3 376 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 CD93Q9NPY3 652 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 MBD1Q9UIS9 605 aaPredicted RBP12.32□□□□□ -0.44
USP8-209ENST00000560297 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
USP8-209ENST00000560297 UTP11Q9Y3A2 253 aaKnown RBP12.32□□□□□ -0.44
USP8-209ENST00000560297 CAPN8A6NHC0 703 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 METTL12A8MUP2 240 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 SMAPO00193 183 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 RHOBTB1O94844 696 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 ZNF30P17039 623 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 TPSB2P20231 275 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 VIPR1P32241 457 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 NUDT1P36639 197 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 MMP12P39900 470 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 CCR5P51681 352 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 ARHGEF7Q14155 803 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 GALNT3Q14435 633 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 SPARCL1Q14515 664 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 SIRPB2Q5JXA9 342 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 KIAA0895LQ68EN5 471 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 CEP68Q76N32 757 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 LPCAT2Q7L5N7 544 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 TRIM69Q86WT6 500 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 PPIL6Q8IXY8 311 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 RAVER1Q8IY67 606 aaKnown RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 SLC25A41Q8N5S1 370 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 BBOF1Q8ND07 529 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 CXorf40AQ8TE69 158 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 ZC3H10Q96K80 434 aaKnown RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 ERP44Q9BS26 406 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 CARD6Q9BX69 1037 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
USP8-209ENST00000560297 KCTD5Q9NXV2 234 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 HACD3Q9P035 362 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 B4GALT6Q9UBX8 382 aa12.31□□□□□ -0.44
USP8-209ENST00000560297 EFCAB8A8MWE9 144 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 PSMD11O00231 422 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 RAD51CO43502 376 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 RNGTTO60942 597 aaKnown RBP12.3□□□□□ -0.44
USP8-209ENST00000560297 PRKCGP05129 697 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 CTPS1P17812 591 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 ITIH2P19823 946 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 IVDP26440 423 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 PTPN5P54829 565 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 TUBB4BP68371 445 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 CDH17Q12864 832 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 SGCGQ13326 291 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 KCNJ11Q14654 390 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 ELF2Q15723 593 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 LRRC73Q5JTD7 316 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 DENND5AQ6IQ26 1287 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 C8orf74Q6P047 294 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 CRTC1Q6UUV9 634 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 PPP1R21Q6ZMI0 780 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 HOOK3Q86VS8 718 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 HORMAD1Q86X24 394 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 CBARPQ8N350 705 aaPredicted RBP12.3□□□□□ -0.44
USP8-209ENST00000560297 DNAAF3Q8N9W5 541 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 MCUQ8NE86 351 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 BRSK1Q8TDC3 778 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 ASB12Q8WXK4 309 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 CPT1BQ92523 772 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 SNF8Q96H20 258 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 APOL2Q9BQE5 337 aa12.3□□□□□ -0.44
USP8-209ENST00000560297 A0A1W2PQU0 124 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 PRR23AA6NEV1 266 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 IGLON5A6NGN9 336 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 A8MX80 341 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 C10orf142B7Z368 130 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 DNALI1O14645 258 aaPredicted RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 SPINT1O43278 529 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 LATO43561 262 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 MMP20O60882 483 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 USP12O75317 370 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 TM7SF2O76062 418 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 HEXIM1O94992 359 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms