RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TRIM23P36406 574 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 NOP2P46087 812 aaKnown RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 NR2C2P49116 596 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 HNRNPKP61978 463 aaKnown RBP eCLIP13.27□□□□□ -0.299e-8■■■■□ 22
SMAD3-213ENST00000560175 FOXC1Q12948 553 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 IRF4Q15306 451 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PROX2Q3B8N5 592 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PTAR1Q7Z6K3 402 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PARGQ86W56 976 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 RAVER1Q8IY67 606 aaKnown RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 RCOR2Q8IZ40 523 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 CHCHD4Q8N4Q1 142 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 EID2Q8N6I1 236 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 OR4C6Q8NH72 309 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 COQ10AQ96MF6 247 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 LGMNQ99538 433 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 SEMA3CQ99985 751 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 LACRTQ9GZZ8 138 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PNMA8BQ9ULN7 279 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 COQ6Q9Y2Z9 468 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 MAP1BP46821 2468 aaKnown RBP13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PSMD11O00231 422 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 TRIM38O00635 465 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 ENC1O14682 589 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 APOL1O14791 398 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 SCAMP1O15126 338 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 SPOPO43791 374 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 HYAL3O43820 417 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 RECQL5O94762 991 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 HEXIM1O94992 359 aaKnown RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 ZRANB2O95218 330 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 LDOC1O95751 146 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PRKCGP05129 697 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 HLA-DQB2P05538 268 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 MMP2P08253 660 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PDHA1P08559 390 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 CDK4P11802 303 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 VAV2P52735 878 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 NIPAL4Q0D2K0 466 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 MTM1Q13496 603 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PDE1CQ14123 709 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PDK1Q15118 436 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 ARMC12Q5T9G4 340 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 SPOCD1Q6ZMY3 1216 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 MACC1Q6ZN28 852 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 TMPRSS7Q7RTY8 843 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 NLRP8Q86W28 1048 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PNPLA1Q8N8W4 532 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 EXD1Q8NHP7 514 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 GATA6Q92908 595 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 TADA1Q96BN2 335 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 CNTNAP3BQ96NU0 1288 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 LYSMD1Q96S90 227 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 APOOQ9BUR5 198 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 MAK16Q9BXY0 300 aaKnown RBP13.26□□□□□ -0.29
SMAD3-213ENST00000560175 CNTNAP3Q9BZ76 1288 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 CAAP1Q9H8G2 361 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 EPG5Q9HCE0 2579 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 HAUS2Q9NVX0 235 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 UCKL1Q9NWZ5 548 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 B4GALT6Q9UBX8 382 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 FTSJ1Q9UET6 329 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 RAI2Q9Y5P3 530 aa13.26□□□□□ -0.29
SMAD3-213ENST00000560175 hCG_1818297A0A087WSY0 165 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 A0A0J9YYE9 177 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 NEMP2A6NFY4 417 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TPP1O14773 563 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 LZTS3O60299 673 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 SDC3O75056 442 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CPP00450 1065 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 JCHAINP01591 159 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TRBC1P01850 177 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 KRT1P04264 644 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CAPNS1P04632 268 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CKMT2P17540 419 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 LHCGRP22888 699 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ACP1P24666 158 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 NFKBIAP25963 317 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 VIPR1P32241 457 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ACADVLP49748 655 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 SEMG2Q02383 582 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ADCY2Q08462 1091 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ILKQ13418 452 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TFDP2Q14188 446 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 INPP5AQ14642 412 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 SMAD1Q15797 465 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms