RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 FOXR1Q6PIV2 292 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 GCNT7Q6ZNI0 430 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 MAGOHBQ96A72 148 aaKnown RBP20.77■□□□□ 0.92
PSEN1-225ENST00000560005 RHOXF2Q9BQY4 288 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 LRRC19Q9H756 370 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 SLC25A13Q9UJS0 675 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 PCDHGA8Q9Y5G5 932 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 ENTPD2Q9Y5L3 495 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 BSNQ9UPA5 3926 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 CPED1A4D0V7 1026 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 FAM187AA6NFU0 413 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 CDRT15L2A8MXV6 281 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 M0QYT0 321 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 ALOX15BO15296 676 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 ATP9BO43861 1147 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 ERLIN1O75477 346 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 CDKN2BP42772 138 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 CLN3Q13286 438 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 KRT81Q14533 505 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 BRD3Q15059 726 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 TAZQ16635 292 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 ATP13A4Q4VNC1 1196 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 SYPL2Q5VXT5 272 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 CXorf57Q6NSI4 855 aaKnown RBP20.76■□□□□ 0.91
PSEN1-225ENST00000560005 GUSBP11Q6P575 273 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 MFSD7Q6UXD7 560 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 EFL1Q7Z2Z2 1120 aaKnown RBP20.76■□□□□ 0.91
PSEN1-225ENST00000560005 BNIPLQ7Z465 357 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 HORMAD1Q86X24 394 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 KLHL7Q8IXQ5 586 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 EXD3Q8N9H8 876 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 GRK7Q8WTQ7 553 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 RAPGEF5Q92565 580 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 HSPH1Q92598 858 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 ARRDC3Q96B67 414 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 IFT43Q96FT9 208 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 BTN2A3PQ96KV6 586 aa20.76■□□□□ 0.91
PSEN1-225ENST00000560005 TLN1Q9Y490 2541 aaKnown RBP20.76■□□□□ 0.91
PSEN1-225ENST00000560005 KIF26BQ2KJY2 2108 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 hCG_1818297A0A087WSY0 165 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 TCF4P15884 667 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 VASPP50552 380 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 CDH6P55285 790 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 HNRNPKP61978 463 aaKnown RBP eCLIP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ZNF177Q13360 481 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 CCNG2Q16589 344 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 C6orf132Q5T0Z8 1188 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ZCCHC8Q6NZY4 707 aaKnown RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 AADACL2Q6P093 401 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 NEK5Q6P3R8 708 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 CRTC1Q6UUV9 634 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 Q6ZSR6 202 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ABI3BPQ7Z7G0 1075 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 LURAP1LQ8IV03 231 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 IFT20Q8IY31 132 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ZNF548Q8NEK5 533 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 NTAN1Q96AB6 310 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 GRAMD1AQ96CP6 724 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 LRRC1Q9BTT6 524 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 PARD6BQ9BYG5 372 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 ANKZF1Q9H8Y5 726 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 WDR70Q9NW82 654 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 RCOR3Q9P2K3 495 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-225ENST00000560005 PCYOX1Q9UHG3 505 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 RAB21Q9UL25 225 aa20.75■□□□□ 0.91
PSEN1-225ENST00000560005 TCAF2A6NFQ2 919 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 KPNA3O00505 521 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 CTSLP07711 333 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 ZFXP17010 805 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 MTA1Q13330 715 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 KLF1Q13351 362 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 NAA30Q147X3 362 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 SMTNL2Q2TAL5 461 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 TXNRD3NBQ6F5E7 133 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 RBM44Q6ZP01 1051 aaKnown RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 SYDE1Q6ZW31 735 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 PTAR1Q7Z6K3 402 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 ARL14Q8N4G2 192 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 PRELID2Q8N945 189 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 FAM71BQ8TC56 605 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 ANKRD7Q92527 254 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 ALG14Q96F25 216 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 RAB17Q9H0T7 212 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 FAM204AQ9H8W3 233 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.74■□□□□ 0.91
PSEN1-225ENST00000560005 FLNCQ14315 2725 aa20.74■□□□□ 0.91
PSEN1-225ENST00000560005 C3orf70A6NLC5 250 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-225ENST00000560005 TNFSF15O95150 251 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 COILP38432 576 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-225ENST00000560005 ARSEP51690 589 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 OXCT1P55809 520 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 DPYSL2Q16555 572 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 MAP9Q49MG5 647 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 EFHC2Q5JST6 749 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 TTC39BQ5VTQ0 682 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-225ENST00000560005 SEL1L3Q68CR1 1132 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 DRICH1Q6PGQ1 229 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-225ENST00000560005 BBS12Q6ZW61 710 aa20.73■□□□□ 0.91
PSEN1-225ENST00000560005 SH2D3CQ8N5H7 860 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms