RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ATXN3LQ9H3M9 355 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 POMKQ9H5K3 350 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 MTRRQ9UBK8 725 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ZDHHC2Q9UIJ5 367 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CDH22Q9UJ99 828 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 DNMT3LQ9UJW3 386 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SSX2IPQ9Y2D8 614 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 VWA7Q9Y334 891 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 ARIH1Q9Y4X5 557 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-212ENST00000559937 BACE2Q9Y5Z0 518 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 CEP290O15078 2479 aa8.13□□□□□ -1.11
SMAD3-212ENST00000559937 SCN8AQ9UQD0 1980 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 ILVBLA1L0T0 632 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 A8MT66 165 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 MEI4A8MW99 385 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 E9PBE3 544 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 SDHDO14521 159 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 KLHL41O60662 606 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CLDN11O75508 207 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 IPO13O94829 963 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CRTAMO95727 393 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 LATS1O95835 1130 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 GLP2RO95838 553 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 GALTP07902 379 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CCDC166P0CW27 439 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 FDXRP22570 491 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 ATP4BP51164 291 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 INHBCP55103 352 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 MAXP61244 160 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 GNA12Q03113 381 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 TBL3Q12788 808 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CYLC2Q14093 348 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CSHL1Q14406 222 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 MAPRE2Q15555 327 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 GSTA3Q16772 222 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 TYSND1Q2T9J0 566 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 RTP2Q5QGT7 225 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 SLC8B1Q6J4K2 584 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 FBXO46Q6PJ61 603 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 TRIM67Q6ZTA4 783 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 FRMD7Q6ZUT3 714 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 SDCCAG8Q86SQ7 713 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF354CQ86Y25 554 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 RNF168Q8IYW5 571 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 DEFB107AQ8IZN7 70 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 LRRC43Q8N309 656 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 FBXW8Q8N3Y1 598 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CCNYL1Q8N7R7 359 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 NRG4Q8WWG1 115 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 HDAC10Q969S8 669 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 PSKH2Q96QS6 385 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 TRIB3Q96RU7 358 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 TCF12Q99081 682 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 SEPT5Q99719 369 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 OLFM1Q99784 485 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 DDX50Q9BQ39 737 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CXorf56Q9H5V9 222 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 CWH43Q9H720 699 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 S100A14Q9HCY8 104 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 MRPL40Q9NQ50 206 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 INTS10Q9NVR2 710 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 GEMIN8Q9NWZ8 242 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 UTP6Q9NYH9 597 aaKnown RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 UBA2Q9UBT2 640 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-212ENST00000559937 STK39Q9UEW8 545 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
SMAD3-212ENST00000559937 HELZP42694 1942 aaKnown RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 AURKAO14965 403 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 KDELR3O43731 214 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SMIM24O75264 130 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TBX18O95935 607 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CXCL10P02778 98 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 HMBSP08397 361 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ATF6P18850 670 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CR2P20023 1033 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 IMPDH1P20839 514 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CD9P21926 228 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 EPHA3P29320 983 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ACVRL1P37023 503 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 PPP3CCP48454 512 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ARSDP51689 593 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 OXCT1P55809 520 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ARPP19P56211 112 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SESN3P58005 492 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SULT2A1Q06520 285 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 KLC1Q07866 573 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 DUSP4Q13115 394 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CCNIQ14094 377 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF460Q14592 562 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 IHHQ14623 411 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 GPNMBQ14956 572 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TAF1AQ15573 450 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms