RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 HOXD13P35453 343 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 MXI1P50539 228 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 EIF4A2Q14240 407 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 CTTNQ14247 550 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 RPE65Q16518 533 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 TSTQ16762 297 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 ZNF718Q3SXZ3 478 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 ZNF672Q499Z4 452 aaPredicted RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 SLC9C2Q5TAH2 1124 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 TYW3Q6IPR3 259 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 GJB7Q6PEY0 223 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 FAM43BQ6ZT52 329 aaPredicted RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 TMTC3Q6ZXV5 915 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 ARMC8Q8IUR7 673 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 GHDCQ8N2G8 530 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 NGEFQ8N5V2 710 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 OR4N2Q8NGD1 307 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 NSUN4Q96CB9 384 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 ADGRG7Q96K78 797 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 REEP2Q9BRK0 252 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 MMTAG2Q9BU76 263 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 HERC2P3Q9BVR0 1158 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 IL25Q9H293 177 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 CXorf56Q9H5V9 222 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 ZCCHC17Q9NP64 241 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 KRT84Q9NSB2 600 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 HAUS2Q9NVX0 235 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 CFDP1Q9UEE9 299 aaPredicted RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 GIMAP2Q9UG22 337 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 SUFUQ9UMX1 484 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 CNPY2Q9Y2B0 182 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 MAGED1Q9Y5V3 778 aaPredicted RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 P4HA2O15460 535 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 LINC01565O15544 149 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 PTP4A3O75365 173 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 DNTTP04053 509 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 RPL3P39023 403 aaKnown RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 CCR9P51686 369 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 BNC1Q01954 994 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 FAM27E3Q08E93 113 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 ZNF484Q5JVG2 852 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 CBWD5Q5RIA9 395 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 ATG16L1Q676U5 607 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 KLHL24Q6TFL4 600 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 GSG1LQ6UXU4 331 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 USP43Q70EL4 1123 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 ANKRD44Q8N8A2 993 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 SETD9Q8NE22 299 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 MCPH1Q8NEM0 835 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 LILRB1Q8NHL6 650 aaPredicted RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 CEP70Q8NHQ1 597 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 CREB3L4Q8TEY5 395 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 SH3KBP1Q96B97 665 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 OTULINQ96BN8 352 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 RNF183Q96D59 192 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 RNF125Q96EQ8 232 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 HES6Q96HZ4 224 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 RBM17Q96I25 401 aaKnown RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 MPHOSPH8Q99549 860 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 BAG1Q99933 345 aaPredicted RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 MSTO1Q9BUK6 570 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 PDCL3Q9H2J4 239 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 MVB12BQ9H7P6 319 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 TTC12Q9H892 705 aaPredicted RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 CHODLQ9H9P2 273 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 CLK4Q9HAZ1 481 aaKnown RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 WDR6Q9NNW5 1121 aaKnown RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 ENTPD7Q9NQZ7 604 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 TMEM51Q9NW97 253 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 TBC1D29Q9UFV1 150 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 CD207Q9UJ71 328 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 DERAQ9Y315 318 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 RRP7AQ9Y3A4 280 aaKnown RBP3.85□□□□□ -1.79
SPG11-218ENST00000559754 NFS1Q9Y697 457 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 PASKQ96RG2 1323 aa3.85□□□□□ -1.79
SPG11-218ENST00000559754 BUB3O43684 328 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 STARD3NLO95772 234 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 ACADMP11310 421 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CTPS1P17812 591 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 PSMA4P25789 261 aaKnown RBP3.84□□□□□ -1.79
SPG11-218ENST00000559754 FMO4P31512 558 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 PSMC2P35998 433 aaKnown RBP3.84□□□□□ -1.79
SPG11-218ENST00000559754 UBA7P41226 1012 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CENPAP49450 140 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 LPIN1Q14693 890 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CTXN3Q4LDR2 81 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 PLEKHO1Q53GL0 409 aaPredicted RBP3.84□□□□□ -1.79
SPG11-218ENST00000559754 DENND1BQ6P3S1 775 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 R3HCC1LQ7Z5L2 792 aaKnown RBP3.84□□□□□ -1.79
SPG11-218ENST00000559754 CHD1LQ86WJ1 897 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CREBRFQ8IUR6 639 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 DENND6AQ8IWF6 608 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CNPY4Q8N129 248 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 RFLNBQ8N5W9 214 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 DNAAF1Q8NEP3 725 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 LINS1Q8NG48 757 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 RASSF8Q8NHQ8 419 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms