RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NCOR2Q9Y618 2525 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CACNA1EQ15878 2313 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 NUMA1Q14980 2115 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PLXND1Q9Y4D7 1925 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 NUP205Q92621 2012 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PI4KAP42356 2102 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MACROD2A1Z1Q3 448 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 TTC24A2A3L6 582 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 POM121BA6NF01 834 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 C3orf70A6NLC5 250 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA8CPA6NN73 597 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 A8MX80 341 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 KCNK1O00180 336 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PSMD11O00231 422 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CACNB4O00305 520 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 SCAMP1O15126 338 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MUSKO15146 869 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 KRT86O43790 486 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CST8O60676 142 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SDC3O75056 442 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 ZNF189O75820 626 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 RECQL5O94762 991 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 STK10O94804 968 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 TJP3O95049 919 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PGLSO95336 258 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MAP3K6O95382 1288 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PEX11BO96011 259 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CPP00450 1065 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 JCHAINP01591 159 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PCCBP05166 539 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PYGLP06737 847 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 C1SP09871 688 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 FTH1P19P0C7X4 201 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CTSEP14091 401 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 NME1P15531 152 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 ZNF30P17039 623 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 JUNDP17535 347 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CKMT2P17540 419 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CR2P20023 1033 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 FECHP22830 423 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 DGKAP23743 735 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 HNF1BP35680 557 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CDKN2BP42772 138 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 RPIAP49247 311 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 DUSP3P51452 185 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 RWDD2BP57060 319 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PFN3P60673 137 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 RPL26P61254 145 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 SHC2P98077 582 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 DAB2P98082 770 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PPARDQ03181 441 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 ILKQ13418 452 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MTM1Q13496 603 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PEX6Q13608 980 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 FGL2Q14314 439 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 INPP5AQ14642 412 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 ACOX1Q15067 660 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 AGERQ15109 404 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 WSCD2Q2TBF2 565 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CCDC157Q569K6 752 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 FAXCQ5TGI0 409 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 DENND2CQ68D51 928 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MFSD7Q6UXD7 560 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 LIPIQ6XZB0 460 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MACC1Q6ZN28 852 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 GCNT7Q6ZNI0 430 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 DPPA4Q7L190 304 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PEX26Q7Z412 305 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 NT5DC3Q86UY8 548 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 GATAD2AQ86YP4 633 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 KATNAL2Q8IYT4 538 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SLC22A18ASQ8N1D0 253 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SDR16C5Q8N3Y7 309 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 RNF10Q8N5U6 811 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 EID2Q8N6I1 236 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PQLC3Q8N755 202 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 EXD1Q8NHP7 514 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CCHCR1Q8TD31 782 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 MAML1Q92585 1016 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 LRRC45Q96CN5 670 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SCRN2Q96FV2 425 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CNDP2Q96KP4 475 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 BMFQ96LC9 184 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 AGAP3Q96P47 875 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SRPK1Q96SB4 655 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 VAT1Q99536 393 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 KLF6Q99612 283 aaPredicted RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 IL12RB2Q99665 862 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 ABCG4Q9H172 646 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 WDR26Q9H7D7 661 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PCDH9Q9HC56 1237 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 NLGN3Q9NZ94 848 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SEPT10Q9P0V9 454 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 SPASTQ9UBP0 616 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms