RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZNF558Q96NG5 402 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 OLFM1Q99784 485 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 TRMOQ9BU70 441 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 INTS10Q9NVR2 710 aaKnown RBP11.33□□□□□ -0.6
CLPX-204ENST00000559152 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
CLPX-204ENST00000559152 MCM8Q9UJA3 840 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 TYW5A2RUC4 315 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 PFDN6O15212 129 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 DCXO43602 365 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 PSMG1O95456 288 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 SEC24AO95486 1093 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 CPOXP36551 454 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 SATB1Q01826 763 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 KLF10Q13118 480 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 RAB33AQ14088 237 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ACSBG2Q5FVE4 666 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 CPSF7Q8N684 471 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 TBATAQ96M53 351 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 TCF12Q99081 682 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 RTKNQ9BST9 563 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 KLF16Q9BXK1 252 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 CATSPERZQ9NTU4 200 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 GREB1Q4ZG55 1949 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 C2orf81A6NN90 581 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 E9PBE3 544 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 AURKAO14965 403 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 KLHL41O60662 606 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 GOT2P00505 430 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 PMLP29590 882 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ARSDP51689 593 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 EPHB3P54753 998 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 SLC34A1Q06495 639 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 GALNT3Q14435 633 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 TAF1AQ15573 450 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 ACCSLQ4AC99 568 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ZNF789Q5FWF6 425 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 LSMEM2Q8N112 164 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 RP9Q8TA86 221 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 PRICKLE1Q96MT3 831 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 VN1R3Q9BXE9 311 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 NLE1Q9NVX2 485 aaPredicted RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 NDE1Q9NXR1 346 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 STK39Q9UEW8 545 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ZDHHC2Q9UIJ5 367 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
CLPX-204ENST00000559152 ARL5AQ9Y689 179 aa11.32□□□□□ -0.6
CLPX-204ENST00000559152 ABHD14A-ACY1A0A1B0GW23 586 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 PRRG1O14668 218 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 GRID2O43424 1007 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 WISP3O95389 354 aaPredicted RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 KLKB1P03952 638 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 URODP06132 367 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 COX4I1P13073 169 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 LAG3P18627 525 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 CR2P20023 1033 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 FDXRP22570 491 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 PPARGP37231 505 aaPredicted RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 PTDSS1P48651 473 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 SCNN1BP51168 640 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 ACTR3P61158 418 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TLE2Q04725 743 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 PLD1Q13393 1074 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 RCN1Q15293 331 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TYSND1Q2T9J0 566 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 LSM12Q3MHD2 195 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 RALGPS1Q5JS13 557 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
CLPX-204ENST00000559152 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
CLPX-204ENST00000559152 MAPK15Q8TD08 544 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms