RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KIF19Q2TAC6 998 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 CCDC81Q6ZN84 652 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ERN2Q76MJ5 926 aaKnown RBP6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 PARS2Q7L3T8 475 aaKnown RBP6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 POLNQ7Z5Q5 900 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TRIM69Q86WT6 500 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 GAS2L3Q86XJ1 694 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZNF354CQ86Y25 554 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TP53INP2Q8IXH6 220 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 TEKT4Q8WW24 435 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 EDARADDQ8WWZ3 215 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZDHHC5Q9C0B5 715 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 SLC39A8Q9C0K1 460 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZDHHC6Q9H6R6 413 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 PREBQ9HCU5 417 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 SPTLC3Q9NUV7 552 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ETNK2Q9NVF9 386 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 LHX3Q9UBR4 397 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 IP6K2Q9UHH9 426 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 IGF2RP11717 2491 aa6.11□□□□□ -1.43
CTDSPL2-204ENST00000558966 ANKRD36A6QL64 1941 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 MAP1BP46821 2468 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ARID1BQ8NFD5 2236 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 UPK3BL1B0FP48 263 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 UPK3BL2E5RIL1 263 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 DAPK3O43293 454 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 AKR1B10O60218 316 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 PRAMEF11O60813 436 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ECEL1O95672 775 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ADRB1P08588 477 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 TPM1P09493 284 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 H2AFZP0C0S5 128 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 TMEM253P0C7T8 217 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ITGB7P26010 798 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CTSKP43235 329 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 HCAR3P49019 387 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 PAPOLAP51003 745 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 NOVA1P51513 510 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 NEK3P51956 506 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 LRRC14Q15048 493 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CYTH1Q15438 398 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 HLA-BQ31612 363 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 BOLA3Q53S33 107 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 INO80DQ53TQ3 878 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 N4BP2L1Q5TBK1 243 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 NAPEPLDQ6IQ20 393 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ARHGAP36Q6ZRI8 547 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 H2AFVQ71UI9 128 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CNGA4Q8IV77 575 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 TC2NQ8N9U0 490 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 DEFB124Q8NES8 71 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CASKIN2Q8WXE0 1202 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 GATAD2BQ8WXI9 593 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CTNNBL1Q8WYA6 563 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 HSPH1Q92598 858 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 GAL3ST3Q96A11 431 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 PPP1R16AQ96I34 528 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 EXOC2Q96KP1 924 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CSPG4P5Q96PW8 444 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 TRIM5Q9C035 493 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 DEF6Q9H4E7 631 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 GAREM1Q9H706 876 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 NHEJ1Q9H9Q4 299 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 DYRK4Q9NR20 520 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZNHIT6Q9NWK9 470 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 CTTNBP2NLQ9P2B4 639 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 UVRAGQ9P2Y5 699 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 PPT2Q9UMR5 302 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZFR2Q9UPR6 939 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 ANKRD6Q9Y2G4 727 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 SHROOM3Q8TF72 1996 aa6.1□□□□□ -1.43
CTDSPL2-204ENST00000558966 A0A1W2PQU0 124 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 FAM221AA4D161 298 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 ARHGAP42A6NI28 874 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 H0Y8X5 98 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 MYO1FO00160 1098 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 KRIT1O00522 736 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 KCNK3O14649 394 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 VILLO15195 856 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 INSIG1O15503 277 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 RNGTTO60942 597 aaKnown RBP6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 PROSCO94903 275 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 POP4O95707 220 aaKnown RBP6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 CER1O95813 267 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 UGT2B4P06133 528 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 CD48P09326 243 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 ZNF883P0CG24 379 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 CEACAM1P13688 526 aa6.09□□□□□ -1.43
CTDSPL2-204ENST00000558966 ADRB3P13945 408 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms