RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 BBS5Q8N3I7 341 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.98□□□□□ -0.49
HERC1-202ENST00000558324 DCBLD1Q8N8Z6 715 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 FAM181AQ8N9Y4 354 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 MAPK15Q8TD08 544 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 RFFLQ8WZ73 363 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 PDXPQ96GD0 296 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 APOOQ9BUR5 198 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 CLPBQ9H078 707 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 SYNDIG1Q9H7V2 258 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 NOD2Q9HC29 1040 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 SIRPGQ9P1W8 387 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 B4GALT6Q9UBX8 382 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 KLQ9UEF7 1012 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 DOLKQ9UPQ8 538 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 PCDHB1Q9Y5F3 818 aa11.98□□□□□ -0.49
HERC1-202ENST00000558324 TDRD6O60522 2096 aaKnown RBP11.98□□□□□ -0.49
HERC1-202ENST00000558324 TOR1BO14657 336 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 ZZEF1O43149 2961 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 AKR1B10O60218 316 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 H2AFZP0C0S5 128 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 CTSEP14091 401 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 CR2P20023 1033 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 IL4RP24394 825 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
HERC1-202ENST00000558324 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
HERC1-202ENST00000558324 HK3P52790 923 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 ITKQ08881 620 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 TRAF2Q12933 501 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 MTM1Q13496 603 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 TRIM14Q14142 442 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 DPYSL3Q14195 570 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 MARC1Q5VT66 337 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 KCTD16Q68DU8 428 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 NCBP2-AS2Q69YL0 99 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 H2AFVQ71UI9 128 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 SLC35F3Q8IY50 421 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 KCTD6Q8NC69 237 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 OR8K1Q8NGG5 319 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 PCDH19Q8TAB3 1148 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 LRRN4Q8WUT4 740 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 WDR92Q96MX6 357 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 MGME1Q9BQP7 344 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 ZNHIT6Q9NWK9 470 aaKnown RBP11.97□□□□□ -0.49
HERC1-202ENST00000558324 RCOR3Q9P2K3 495 aaPredicted RBP11.97□□□□□ -0.49
HERC1-202ENST00000558324 UVRAGQ9P2Y5 699 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 TTLL3Q9Y4R7 772 aa11.97□□□□□ -0.49
HERC1-202ENST00000558324 GOLGA6CA6NDK9 693 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GOLGA6BA6NDN3 693 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 LMO7DNF2Z398 122 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CACNB4O00305 520 aaPredicted RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 TPP1O14773 563 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CASC3O15234 703 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 YY2O15391 372 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 BRINP1O60477 761 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 MFAP3LO75121 409 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 SOCS5O75159 536 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CSO75390 466 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 RASGRP1O95267 797 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GP1BAP07359 652 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 TPM1P09493 284 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GOLGA6DP0CG33 693 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CTPS1P17812 591 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GM2AP17900 193 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 TGM2P21980 687 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 PEX5P50542 639 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 BLKP51451 505 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 ARSEP51690 589 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 SRP54P61011 504 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 GALNT2Q10471 571 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 MESDQ14696 234 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 PTPRRQ15256 657 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CNGA3Q16281 694 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 PERM1Q5SV97 790 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 VSTM4Q8IW00 320 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 PELI3Q8N2H9 469 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GLMNQ92990 594 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 FUBP1Q96AE4 644 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 NUS1Q96E22 293 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 DEPDC7Q96QD5 511 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 CHP1Q99653 195 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 BOCQ9BWV1 1114 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 NRSN2Q9GZP1 204 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 SUDS3Q9H7L9 328 aaPredicted RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 FGF22Q9HCT0 170 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 MRPL40Q9NQ50 206 aaKnown RBP11.96□□□□□ -0.49
HERC1-202ENST00000558324 ABHD10Q9NUJ1 306 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 SPTLC3Q9NUV7 552 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 NCKIPSDQ9NZQ3 722 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 GULP1Q9UBP9 304 aa11.96□□□□□ -0.49
HERC1-202ENST00000558324 MOSPD1Q9UJG1 213 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms