RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 HIPK4Q8NE63 616 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 CFAP61Q8NHU2 1237 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 PANX3Q96QZ0 392 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 TRPM5Q9NZQ8 1165 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 UBA2Q9UBT2 640 aaPredicted RBP10.61□□□□□ -0.71
TPM1-210ENST00000558264 RAP2CQ9Y3L5 183 aa10.61□□□□□ -0.71
TPM1-210ENST00000558264 UBA6A0AVT1 1052 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 GPR39O43194 453 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 CDKN1CP49918 316 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 TRIM68Q6AZZ1 485 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 ZNF549Q6P9A3 640 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 LPCAT1Q8NF37 534 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 OR6K2Q8NGY2 324 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 CALML6Q8TD86 181 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 STMN2Q93045 179 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 TADA1Q96BN2 335 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 SIKE1Q9BRV8 207 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 FAM96AQ9H5X1 160 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 BPIFA1Q9NP55 256 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 PAK6Q9NQU5 681 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 MCM8Q9UJA3 840 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 MID2Q9UJV3 735 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 VWA7Q9Y334 891 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 A8MT66 165 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 ALDH1A3P47895 512 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 SMARCB1Q12824 385 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 ZNF177Q13360 481 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 FAM83EQ2M2I3 478 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 TECRLQ5HYJ1 363 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 C1orf146Q5VVC0 180 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 SLC39A5Q6ZMH5 540 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 CARNMT1Q8N4J0 409 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 ZNF461Q8TAF7 563 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 RDH11Q8TC12 318 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 C2orf15Q8WU43 125 aaKnown RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 VWCEQ96DN2 955 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 LENG8Q96PV6 779 aaPredicted RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 RANBP9Q96S59 729 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 MRPL57Q9BQC6 102 aaKnown RBP10.6□□□□□ -0.71
TPM1-210ENST00000558264 MFSD1Q9H3U5 465 aa10.6□□□□□ -0.71
TPM1-210ENST00000558264 CDH23Q9H251 3354 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 A0A087X1B8 175 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 A0A088AWK7 358 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 LRRC14BA6NHZ5 514 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 HDAC3O15379 428 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 CD3EAPO15446 510 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 SLC7A4O43246 635 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TBX10O75333 385 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TM7SF2O76062 418 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 PSMG1O95456 288 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 GLP2RO95838 553 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 CXCL10P02778 98 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 MBL2P11226 248 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 HDCP19113 662 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 MZF1P28698 734 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 CLCN5P51795 746 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 KPNA1P52294 538 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 CDH4P55283 916 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 ZXDBP98169 803 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 KLF10Q13118 480 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 IKBKEQ14164 716 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 ARL14EPQ8N8R7 260 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 OR4K2Q8NGD2 314 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TMEM169Q96HH4 297 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 STN1Q9H668 368 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 ZNF334Q9HCZ1 680 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 PLK2Q9NYY3 685 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 NCKIPSDQ9NZQ3 722 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 TSR3Q9UJK0 312 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 FAM50BQ9Y247 325 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 SSX2IPQ9Y2D8 614 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 AIM2O14862 343 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 C1RP00736 705 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 FGF1P05230 155 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 COL6A2P12110 1019 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 COX4I1P13073 169 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 PMLP29590 882 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 MAP2K2P36507 400 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 ABL2P42684 1182 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 SMAD3P84022 425 aaKnown RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 PRKAA1Q13131 559 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TAF11Q15544 211 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 KIAA0408Q6ZU52 694 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 GLT6D1Q7Z4J2 308 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 MDGA1Q8NFP4 955 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 WFDC5Q8TCV5 224 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 NRG4Q8WWG1 115 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
TPM1-210ENST00000558264 FATE1Q969F0 183 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 PTERQ96BW5 349 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 FEM1CQ96JP0 617 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms