RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 ZNF542PQ5EBM4 170 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 ZFYVE27Q5T4F4 411 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 TIGD7Q6NT04 549 aaPredicted RBP13.64□□□□□ -0.23
ALPK3-202ENST00000558077 SPOCD1Q6ZMY3 1216 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 NYAP1Q6ZVC0 841 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
ALPK3-202ENST00000558077 DCP2Q8IU60 420 aaKnown RBP13.64□□□□□ -0.23
ALPK3-202ENST00000558077 CCDC13Q8IYE1 715 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 KATNAL2Q8IYT4 538 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 COL26A1Q96A83 441 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 IFT43Q96FT9 208 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 CDC6Q99741 560 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 BAG1Q99933 345 aaPredicted RBP13.64□□□□□ -0.23
ALPK3-202ENST00000558077 HERPUD2Q9BSE4 406 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
ALPK3-202ENST00000558077 B4GALT6Q9UBX8 382 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 AMACRQ9UHK6 382 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 PCDHB9Q9Y5E1 797 aa13.64□□□□□ -0.23
ALPK3-202ENST00000558077 ASXL3Q9C0F0 2248 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 FAM221BA6H8Z2 402 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 SDC3O75056 442 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 JCHAINP01591 159 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 ITGAVP06756 1048 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 MX2P20592 715 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 DGKAP23743 735 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 RABIFP47224 123 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 VAV2P52735 878 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 IFI35P80217 286 aaPredicted RBP13.63□□□□□ -0.23
ALPK3-202ENST00000558077 ZBTB17Q13105 803 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 LLGL1Q15334 1064 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
ALPK3-202ENST00000558077 PELI3Q8N2H9 469 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 BBS5Q8N3I7 341 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 EID2Q8N6I1 236 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 PNPLA1Q8N8W4 532 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 LRRC57Q8N9N7 239 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 PLA2G15Q8NCC3 412 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 NSMCE1Q8WV22 266 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 ADAMTS14Q8WXS8 1223 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 COQ10AQ96MF6 247 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
ALPK3-202ENST00000558077 SAE1Q9UBE0 346 aaPredicted RBP13.63□□□□□ -0.23
ALPK3-202ENST00000558077 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 HEY1Q9Y5J3 304 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 RAI2Q9Y5P3 530 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 FRYQ5TBA9 3013 aa13.63□□□□□ -0.23
ALPK3-202ENST00000558077 hCG_1818297A0A087WSY0 165 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 A0A0U1RQS6 177 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 A8MX80 341 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 KCNK1O00180 336 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 TRIM38O00635 465 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 APOL1O14791 398 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 TNFSF14O43557 240 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 HYAL3O43820 417 aaPredicted RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 PIAS2O75928 621 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 CPP00450 1065 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 CSF2P04141 144 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 NME1P15531 152 aaKnown RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 PECAM1P16284 738 aaPredicted RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 LHCGRP22888 699 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 PEX5P50542 639 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 YPEL5P62699 121 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 POLR2LP62875 67 aaKnown RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 PDE1CQ14123 709 aaPredicted RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 LRRC14Q15048 493 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 CNGA3Q16281 694 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 CFAP58Q5T655 872 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 ERAP2Q6P179 960 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 RFX6Q8HWS3 928 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 CHCHD4Q8N4Q1 142 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 TCEAL2Q9H3H9 227 aaPredicted RBP13.62□□□□□ -0.23
ALPK3-202ENST00000558077 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 ANGPTL2Q9UKU9 493 aa13.62□□□□□ -0.23
ALPK3-202ENST00000558077 GRID2IPA4D2P6 1211 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 LZTS3O60299 673 aaPredicted RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 CST8O60676 142 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 ZRANB2O95218 330 aaKnown RBP eCLIP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 ZFXP17010 805 aaPredicted RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 CES1P23141 567 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 VIPR1P32241 457 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 CTNNA1P35221 906 aaKnown RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 DYNLT1P63172 113 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 SKOR1P84550 965 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 PDK1Q15118 436 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 PRKD1Q15139 912 aaPredicted RBP13.61□□□□□ -0.23
ALPK3-202ENST00000558077 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 DAAM2Q86T65 1068 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
ALPK3-202ENST00000558077 RCOR2Q8IZ40 523 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms