RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 DPPA4Q7L190 304 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 TMEM145Q8NBT3 493 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 LPCAT1Q8NF37 534 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 OR2I1PQ8NGU4 316 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 SPOCK2Q92563 424 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 SKA1Q96BD8 255 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 IMP4Q96G21 291 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 TEKT5Q96M29 485 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 RBM15Q96T37 977 aaKnown RBP eCLIP10.64□□□□□ -0.711e-17■■■■■ 48.5
HNRNPC-232ENST00000557442 VAT1Q99536 393 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 C1QTNF7Q9BXJ2 289 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 TLR10Q9BXR5 811 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 SLC25A51Q9H1U9 297 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 GLOD4Q9HC38 313 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 TMEM9BQ9NQ34 198 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 B4GALT6Q9UBX8 382 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 CDV3Q9UKY7 258 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 PYCARDQ9ULZ3 195 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 PHTF1Q9UMS5 762 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 COQ6Q9Y2Z9 468 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 BPTFQ12830 3046 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 GOLGA4Q13439 2230 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 ARID1BQ8NFD5 2236 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-232ENST00000557442 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 USP27XA6NNY8 438 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 F5H423 210 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 H0Y8X5 98 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ENC1O14682 589 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 VILLO15195 856 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 RAD51BO15315 384 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 KCNN4O15554 427 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 KIF5CO60282 957 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 LZTS3O60299 673 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 FZD6O60353 706 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 CER1O95813 267 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 WNT1P04628 370 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ALPIP09923 528 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 CYP2A6P11509 494 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 CTPS1P17812 591 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 MSNP26038 577 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 CXCR5P32302 372 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 LIG3P49916 1009 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 SKOR1P84550 965 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ARHGAP8P85298 464 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 KIF19Q2TAC6 998 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ZNF569Q5MCW4 686 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 STPG1Q5TH74 334 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 PID1Q7Z2X4 250 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 PTAR1Q7Z6K3 402 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 SLC13A5Q86YT5 568 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 NDUFAF2Q8N183 169 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ZNF567Q8N184 647 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 MINDY1Q8N5J2 469 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 NETO1Q8TDF5 533 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ATG4AQ8WYN0 398 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ZDHHC5Q9C0B5 715 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 RSPH14Q9UHP6 348 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 JRKLQ9Y4A0 524 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 SNX11Q9Y5W9 270 aa10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 ARHGEF17Q96PE2 2063 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-232ENST00000557442 A0A0J9YYE9 177 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 A0A1W2PR77 199 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 CAPN8A6NHC0 703 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 A6NNZ2 444 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 FPGTO14772 594 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 PMPCBO75439 489 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 ZNF189O75820 626 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 MT-CYBP00156 380 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 TRBC1P01850 177 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 LHCGRP22888 699 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 VIPR1P32241 457 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 CD68P34810 354 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 CLDN2P57739 230 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 BNC1Q01954 994 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 ARHGEF7Q14155 803 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 GALNT3Q14435 633 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 SLC14A2Q15849 920 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 CNGA3Q16281 694 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 RSPO4Q2I0M5 234 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 UAP1L1Q3KQV9 507 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 DENND2CQ68D51 928 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 ITPRIPL1Q6GPH6 555 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 IL27RAQ6UWB1 636 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 LIPIQ6XZB0 460 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 GCNT7Q6ZNI0 430 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 SLC35F6Q8N357 371 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 MFSD2AQ8NA29 543 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 DENND6BQ8NEG7 585 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 SPATA22Q8NHS9 363 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 PIH1D2Q8WWB5 315 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 ASB12Q8WXK4 309 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 RMDN1Q96DB5 314 aa10.62□□□□□ -0.71
HNRNPC-232ENST00000557442 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms