RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 KELP23276 732 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PMLP29590 882 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 VIPR1P32241 457 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PEX5P50542 639 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 COPS2P61201 443 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 ACOX1Q15067 660 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CCDC70Q6NSX1 233 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 MFSD7Q6UXD7 560 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 SPOCD1Q6ZMY3 1216 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PGBD5Q8N414 524 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 EID2Q8N6I1 236 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 PLD5Q8N7P1 536 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CENPTQ96BT3 561 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 CNDP2Q96KP4 475 aaKnown RBP13.88□□□□□ -0.19
VPS33B-206ENST00000557358 BMFQ96LC9 184 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 KLF6Q99612 283 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-206ENST00000557358 DUSP23Q9BVJ7 150 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 ADGRE3Q9BY15 652 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 SLC13A1Q9BZW2 595 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 SEPT10Q9P0V9 454 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 RAI2Q9Y5P3 530 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 DNAH14Q0VDD8 3507 aa13.88□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA8CPA6NN73 597 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 CACNB4O00305 520 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 ZNF189O75820 626 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 PGLSO95336 258 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 JUNDP17535 347 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 ITIH2P19823 946 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 CTNNA2P26232 953 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 CDKN2BP42772 138 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 PFN3P60673 137 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 RPL26P61254 145 aaKnown RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 SHC2P98077 582 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 MTM1Q13496 603 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 IRF4Q15306 451 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 TMEM139Q8IV31 216 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 UBL4BQ8N7F7 174 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 LGMNQ99538 433 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 SPASTQ9UBP0 616 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 B4GALT6Q9UBX8 382 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 AMFRQ9UKV5 643 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 RPL26L1Q9UNX3 145 aaKnown RBP13.87□□□□□ -0.19
VPS33B-206ENST00000557358 DOLKQ9UPQ8 538 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 COQ6Q9Y2Z9 468 aa13.87□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA4Q13439 2230 aaKnown RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 C3orf70A6NLC5 250 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 KCNK1O00180 336 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PSMD11O00231 422 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 ENC1O14682 589 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PJA2O43164 708 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 SPINT1O43278 529 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 SDC3O75056 442 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 CSF2P04141 144 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PRKCGP05129 697 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PCCBP05166 539 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 C1SP09871 688 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 DGKAP23743 735 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 IGFALSP35858 605 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 DUSP3P51452 185 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 RWDD2BP57060 319 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 IFI35P80217 286 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 CCZ1BP86790 482 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 DAB2P98082 770 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 DSC2Q02487 901 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PPARDQ03181 441 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 SLC10A2Q12908 348 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 TRAF2Q12933 501 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 BNIP3Q12983 259 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 AGERQ15109 404 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PPP2R5EQ16537 467 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 CCDC157Q569K6 752 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 FAXCQ5TGI0 409 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 LIPIQ6XZB0 460 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PEX26Q7Z412 305 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 ZSWIM9Q86XI8 627 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 GALNT15Q8N3T1 639 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 TP53I13Q8NBR0 393 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 ACRBPQ8NEB7 543 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 SCG3Q8WXD2 468 aaKnown RBP13.86□□□□□ -0.19
VPS33B-206ENST00000557358 GLMNQ92990 594 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 HAUS1Q96CS2 278 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 SCRN2Q96FV2 425 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 IL12RB2Q99665 862 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 KCNF1Q9H3M0 494 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 NCKIPSDQ9NZQ3 722 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 BTBD3Q9Y2F9 522 aa13.86□□□□□ -0.19
VPS33B-206ENST00000557358 PCDHGA1Q9Y5H4 931 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms