RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ATP13A5Q4VNC0 1218 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 C17orf99Q6UX52 265 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 TRMT1LQ7Z2T5 733 aaKnown RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 TBC1D26Q86UD7 250 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 SFR1Q86XK3 245 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 FTSJ3Q8IY81 847 aaKnown RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 WBP2Q969T9 261 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 EPHX3Q9H6B9 360 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 ZNF711Q9Y462 761 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 NFE2L3Q9Y4A8 694 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 KIF27Q86VH2 1401 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 CGNL1Q0VF96 1302 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 PRXQ9BXM0 1461 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 FAM172BPA6NC97 362 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 PABPN1LA6NDY0 278 aaKnown RBP4.2□□□□□ -1.74
VRK1-207ENST00000557352 P2RY10O00398 339 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 PEX12O00623 359 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 SRCP12931 536 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 MCM3P25205 808 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 FUT6P51993 359 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 NR1H2P55055 460 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 KRT72Q14CN4 511 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 ADCK5Q3MIX3 580 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 ACCSLQ4AC99 568 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 PPP6R3Q5H9R7 873 aaPredicted RBP4.2□□□□□ -1.74
VRK1-207ENST00000557352 HERC6Q8IVU3 1022 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 SAMD3Q8N6K7 520 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 USP13Q92995 863 aaPredicted RBP4.2□□□□□ -1.74
VRK1-207ENST00000557352 TMEM19Q96HH6 336 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 MROH8Q9H579 483 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 NOD2Q9HC29 1040 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 PTPRHQ9HD43 1115 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 ZFP57Q9NU63 452 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
VRK1-207ENST00000557352 GOLGA3Q08378 1498 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 hCG_1642624A0A1W2PR95 340 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 VWA3AA6NCI4 1184 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 SOCS6O14544 535 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 KLK8O60259 260 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 RFPL2O75678 378 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 CNPP09543 421 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 CFC1P0CG37 223 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 PCNAP12004 261 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 GPTP24298 496 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 CHATP28329 748 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 STX2P32856 288 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 YWHAZP63104 245 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 PDCD2Q16342 344 aaPredicted RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 SYT16Q17RD7 645 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 FAM122CQ6P4D5 195 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 B3GNT6Q6ZMB0 384 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 SUGP1Q8IWZ8 645 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 CIARTQ8N365 385 aaPredicted RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 LRRC8CQ8TDW0 803 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 ZC3HAV1LQ96H79 300 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 TTC14Q96N46 770 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 TWNKQ96RR1 684 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 CD180Q99467 661 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 MPHOSPH6Q99547 160 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 CISD1Q9NZ45 108 aaKnown RBP4.19□□□□□ -1.74
VRK1-207ENST00000557352 GAB2Q9UQC2 676 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 SOGA1O94964 1423 aa4.19□□□□□ -1.74
VRK1-207ENST00000557352 IFT140Q96RY7 1462 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 KLK10O43240 276 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 PLRG1O43660 514 aaKnown RBP4.18□□□□□ -1.74
VRK1-207ENST00000557352 FGF17O60258 216 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 MTA2O94776 668 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 ATP1A1P05023 1023 aaKnown RBP4.18□□□□□ -1.74
VRK1-207ENST00000557352 CETPP11597 493 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 SLC2A4P14672 509 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 CLCN3P51790 818 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 CLDN2P57739 230 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 NAA25Q14CX7 972 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 ANKRD1Q15327 319 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 TAF5Q15542 800 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 ANKRD45Q5TZF3 282 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 WDR73Q6P4I2 378 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 KLHDC8BQ8IXV7 354 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 KIAA2013Q8IYS2 634 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 USP38Q8NB14 1042 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 COG8Q96MW5 612 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 SMYD2Q9NRG4 433 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 C1RLQ9NZP8 487 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 PSAT1Q9Y617 370 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 GREB1LQ9C091 1923 aaPredicted RBP4.18□□□□□ -1.74
VRK1-207ENST00000557352 TAF1P21675 1872 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 CUX2O14529 1486 aa4.18□□□□□ -1.74
VRK1-207ENST00000557352 RUSC2Q8N2Y8 1516 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 C16orf97H3BN30 126 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 MARK3P27448 753 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 CHRNDQ07001 517 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 SLC20A2Q08357 652 aa4.17□□□□□ -1.74
VRK1-207ENST00000557352 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
VRK1-207ENST00000557352 ITGADQ13349 1161 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms