RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RABIFP47224 123 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 RWDD2BP57060 319 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 SEMG2Q02383 582 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 NIPAL4Q0D2K0 466 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 IHHQ14623 411 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 PRAMEF14Q5SWL7 426 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 ARMC12Q5T9G4 340 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 Q6ZSR6 202 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 PEX26Q7Z412 305 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 SLC22A18ASQ8N1D0 253 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 RNF10Q8N5U6 811 aaKnown RBP22.98■■□□□ 1.27
TDP1-216ENST00000556867 CNTD1Q8N815 330 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 TP53I13Q8NBR0 393 aaPredicted RBP22.98■■□□□ 1.27
TDP1-216ENST00000556867 ALG3Q92685 438 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 P3H4Q92791 437 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 B4GALT6Q9UBX8 382 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 AMFRQ9UKV5 643 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 EFR3BQ9Y2G0 817 aa22.98■■□□□ 1.27
TDP1-216ENST00000556867 MED19A0JLT2 244 aaPredicted RBP22.97■■□□□ 1.27
TDP1-216ENST00000556867 FZD6O60353 706 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 CBFA2T3O75081 653 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 NFKBIAP25963 317 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 EPHA8P29322 1005 aaPredicted RBP22.97■■□□□ 1.27
TDP1-216ENST00000556867 PFN3P60673 137 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 IL9RQ01113 521 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 LIPIQ6XZB0 460 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 CAMK1GQ96NX5 476 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 MCCC1Q96RQ3 725 aaPredicted RBP22.97■■□□□ 1.27
TDP1-216ENST00000556867 TDRD1Q9BXT4 1180 aaKnown RBP22.97■■□□□ 1.27
TDP1-216ENST00000556867 PCOLCE2Q9UKZ9 415 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 COQ6Q9Y2Z9 468 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 PPIL1Q9Y3C6 166 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 CAPN6Q9Y6Q1 641 aa22.97■■□□□ 1.27
TDP1-216ENST00000556867 GOLGA6L3A6NEY3 463 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 MIF4GDA9UHW6 222 aaKnown RBP22.96■■□□□ 1.27
TDP1-216ENST00000556867 TOR1BO14657 336 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 ELFN1P0C7U0 828 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 CA4P22748 312 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 IRF4Q15306 451 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.96■■□□□ 1.27
TDP1-216ENST00000556867 BAHD1Q8TBE0 780 aaPredicted RBP22.96■■□□□ 1.27
TDP1-216ENST00000556867 SAP25Q8TEE9 199 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 SETD7Q8WTS6 366 aaKnown RBP22.96■■□□□ 1.27
TDP1-216ENST00000556867 TFB1MQ8WVM0 346 aaKnown RBP22.96■■□□□ 1.27
TDP1-216ENST00000556867 PIH1D2Q8WWB5 315 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 IFT43Q96FT9 208 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 HEMGNQ9BXL5 484 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 OSBPL8Q9BZF1 889 aa22.96■■□□□ 1.27
TDP1-216ENST00000556867 MBNL1Q9NR56 388 aaKnown RBP22.96■■□□□ 1.27
TDP1-216ENST00000556867 APOC4-APOC2K7ER74 178 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 KRT86O43790 486 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 LZTS3O60299 673 aaPredicted RBP22.95■■□□□ 1.26
TDP1-216ENST00000556867 APOC2P02655 101 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 MMP2P08253 660 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 PDHA1P08559 390 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 CYP2A6P11509 494 aaPredicted RBP22.95■■□□□ 1.26
TDP1-216ENST00000556867 VIPR1P32241 457 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 GRK6P43250 576 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 CCZ1BP86790 482 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 CCZ1P86791 482 aaPredicted RBP22.95■■□□□ 1.26
TDP1-216ENST00000556867 LRRC14Q15048 493 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 WSCD2Q2TBF2 565 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 INAVAQ3KP66 663 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 USP45Q70EL2 814 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 UBL4BQ8N7F7 174 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 HAUS1Q96CS2 278 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 SCRN2Q96FV2 425 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 HERPUD2Q9BSE4 406 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 CEP41Q9BYV8 373 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 SEPT10Q9P0V9 454 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 BTBD3Q9Y2F9 522 aa22.95■■□□□ 1.26
TDP1-216ENST00000556867 ARID1BQ8NFD5 2236 aaPredicted RBP22.94■■□□□ 1.26
TDP1-216ENST00000556867 SPTY2D1-AS1A0A0U1RR47 76 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 HACD1B0YJ81 288 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 MTSS1O43312 755 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 FTCDO95954 541 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 ADRB1P08588 477 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 CETN2P41208 172 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 RPL26P61254 145 aaKnown RBP22.94■■□□□ 1.26
TDP1-216ENST00000556867 SKOR1P84550 965 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 CNGA3Q16281 694 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 N4BP2L1Q5TBK1 243 aaPredicted RBP22.94■■□□□ 1.26
TDP1-216ENST00000556867 KDM7AQ6ZMT4 941 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 B4GALNT4Q76KP1 1039 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 KANSL1Q7Z3B3 1105 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 GATAD2AQ86YP4 633 aa22.94■■□□□ 1.26
TDP1-216ENST00000556867 QKIQ96PU8 341 aaKnown RBP eCLIP22.94■■□□□ 1.26
TDP1-216ENST00000556867 RPL26L1Q9UNX3 145 aaKnown RBP22.94■■□□□ 1.26
TDP1-216ENST00000556867 TDRD6O60522 2096 aaKnown RBP22.94■■□□□ 1.26
TDP1-216ENST00000556867 NPIPB15A6NHN6 443 aaPredicted RBP22.93■■□□□ 1.26
TDP1-216ENST00000556867 DDX3YO15523 660 aaKnown RBP22.93■■□□□ 1.26
TDP1-216ENST00000556867 NRDCO43847 1150 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 RECQL5O94762 991 aaPredicted RBP22.93■■□□□ 1.26
TDP1-216ENST00000556867 HEXIM1O94992 359 aaKnown RBP22.93■■□□□ 1.26
TDP1-216ENST00000556867 ITGAVP06756 1048 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 CCDC175P0C221 793 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 PYGMP11217 842 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 GM2AP17900 193 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 LHCGRP22888 699 aa22.93■■□□□ 1.26
TDP1-216ENST00000556867 PTPN3P26045 913 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms