RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 LLGL1Q15334 1064 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SLC1A5Q15758 541 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SLC14A2Q15849 920 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 KBTBD12Q3ZCT8 623 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 ATP13A4Q4VNC1 1196 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 HSP90AA5PQ58FG0 334 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FNBP1LQ5T0N5 605 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 MARCH8Q5T0T0 291 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FAM109BQ6ICB4 259 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 JADE1Q6IE81 842 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CNKSR3Q6P9H4 555 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SCARA5Q6ZMJ2 495 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FAM43BQ6ZT52 329 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 MARK2Q7KZI7 788 aaKnown RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 Q7L0L9 218 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SDCCAG8Q86SQ7 713 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 ZC3H18Q86VM9 953 aaKnown RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FAM228AQ86W67 206 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 LRRC49Q8IUZ0 686 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 UNC45BQ8IWX7 931 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SCUBE1Q8IWY4 988 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 NDUFAF2Q8N183 169 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CRYBG2Q8N1P7 616 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 ANKRD52Q8NB46 1076 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 DBF4BQ8NFT6 615 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 PHOSPHO2Q8TCD6 241 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FAM172AQ8WUF8 416 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TRAPPC12Q8WVT3 735 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 HTR3CQ8WXA8 447 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TFAP2BQ92481 460 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SEPT8Q92599 483 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CENPIQ92674 756 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SKA1Q96BD8 255 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 ZBTB10Q96DT7 871 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CCDC126Q96EE4 140 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 THOC1Q96FV9 657 aaKnown RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 PTCHD1Q96NR3 888 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 FAM111AQ96PZ2 611 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TRAPPC9Q96Q05 1148 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CPXM1Q96SM3 734 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 KCNK16Q96T55 309 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TMEM120AQ9BXJ8 343 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 HAPLN2Q9GZV7 340 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TMPRSS5Q9H3S3 457 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 NRDE2Q9H7Z3 1164 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 LRRC40Q9H9A6 602 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SLC28A3Q9HAS3 691 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 NGRNQ9NPE2 291 aaKnown RBP6.21□□□□□ -1.42
CPSF2-205ENST00000556622 SLC38A7Q9NVC3 462 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 DNAJC28Q9NX36 388 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 THEGQ9P2T0 379 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TSPAN16Q9UKR8 245 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 CHMP2BQ9UQN3 213 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 GINS2Q9Y248 185 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 HEY1Q9Y5J3 304 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 MAD1L1Q9Y6D9 718 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 EVPLQ92817 2033 aa6.21□□□□□ -1.42
CPSF2-205ENST00000556622 TET1Q8NFU7 2136 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SCN5AQ14524 2016 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SMIM35A0A1B0GVV1 85 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 MBLAC1A4D2B0 266 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 B2RBV5 119 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 HUS1O60921 280 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 EFCAB14O75071 495 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 TM7SF2O76062 418 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 BAIAP3O94812 1187 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 NPTXRO95502 500 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 C22orf31O95567 290 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 CXCL10P02778 98 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SERPINE1P05121 402 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 CXCL8P10145 99 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 THRAP10827 490 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 MYL2P10916 166 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 IFNGR1P15260 489 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 CREB1P16220 341 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 HOXB8P17481 243 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 PAMP19021 973 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 GNL1P36915 607 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 GP5P40197 560 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 MATKP42679 507 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 HSPA13P48723 471 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SERPINB8P50452 374 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 CSE1LP55060 971 aaKnown RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 NAA20P61599 178 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 MRPS6P82932 125 aaKnown RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 OGDHQ02218 1023 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 ADCY1Q08828 1119 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 DYNC1I2Q13409 638 aaKnown RBP6.2□□□□□ -1.42
CPSF2-205ENST00000556622 LAPTM5Q13571 262 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 RAB30Q15771 203 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SMTNL2Q2TAL5 461 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 GOLGA7BQ2TAP0 167 aa6.2□□□□□ -1.42
CPSF2-205ENST00000556622 SLC25A52Q3SY17 297 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms