RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ACOT9Q9Y305 439 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 UTP11Q9Y3A2 253 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 FPGT-TNNI3KV9GXZ4 949 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 V9GYQ6 96 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ABCC2Q92887 1545 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 AFF2P51816 1311 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ESYT2A0FGR8 921 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TMEM82A0PJX8 343 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 XKRY2A2RUG3 117 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 NOP56O00567 594 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 TRIM38O00635 465 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 GPR171O14626 319 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TM9SF1O15321 606 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 NUDT21O43809 227 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 NUAK1O60285 661 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SYNCRIPO60506 623 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 EXOC3O60645 756 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CST8O60676 142 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 FMO6PO60774 539 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 KRT37O76014 449 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CCNB2O95067 398 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 IGHA1P01876 353 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 APOA1P02647 267 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 AFPP02771 609 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 TP53P04637 393 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 RARGP13631 454 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 FSTP19883 344 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TNFRSF8P28908 595 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 CD79BP40259 229 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SLCO1A2P46721 670 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 PRRX1P54821 245 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ADKP55263 362 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 C21orf59P57076 290 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 AP1S1P61966 158 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 AMPD2Q01433 879 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF33AQ06730 810 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SNTA1Q13424 505 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 AUHQ13825 339 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 NFYCQ13952 458 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SELPLGQ14242 412 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TRIM25Q14258 630 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 GBX1Q14549 363 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 STARD3Q14849 445 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CCDC6Q16204 474 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SSX2Q16385 188 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF568Q3ZCX4 644 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TRIM61Q5EBN2 209 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 MARCH8Q5T0T0 291 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 STXBP5Q5T5C0 1151 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 RNF219Q5W0B1 726 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 GPAT2Q6NUI2 795 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SLC25A24Q6NUK1 477 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SLC36A4Q6YBV0 504 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 GPBP1Q86WP2 473 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 RASGRP3Q8IV61 690 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SLC41A1Q8IVJ1 513 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 MICU2Q8IYU8 434 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ENTHD1Q8IYW4 607 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 NAGSQ8N159 534 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZGPATQ8N5A5 531 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF366Q8N895 744 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CATSPER1Q8NEC5 780 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 GSTCDQ8NEC7 633 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 OR5T2Q8NGG2 359 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 OR6Q1Q8NGQ2 317 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 PRPF31Q8WWY3 499 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 RFFLQ8WZ73 363 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CPT1BQ92523 772 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 KRT35Q92764 455 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CAVIN3Q969G5 261 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF566Q969W8 418 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CPNE4Q96A23 557 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 NTAN1Q96AB6 310 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TAMM41Q96BW9 452 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 NXPE2Q96DL1 559 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF558Q96NG5 402 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 CSPG4P5Q96PW8 444 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 C12orf57Q99622 126 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 RAD9AQ99638 391 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ZNF184Q99676 751 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 EFHD1Q9BUP0 239 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TMEM120AQ9BXJ8 343 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ASPNQ9BXN1 380 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 BCL2L14Q9BZR8 327 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SENP6Q9GZR1 1112 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 ADAMTS10Q9H324 1103 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TASP1Q9H6P5 420 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TDRD3Q9H7E2 651 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 TXNDC16Q9P2K2 825 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 ASH2LQ9UBL3 628 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 SLC24A2Q9UI40 661 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 DENND2AQ9ULE3 1009 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 STXBP5LQ9Y2K9 1186 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms