RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC10A7Q0GE19 358 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 RALGDSQ12967 914 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 LBRQ14739 615 aaKnown RBP22.72■■□□□ 1.23
ACTN1-220ENST00000556433 IQCB1Q15051 598 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 BOLA3Q53S33 107 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 C3orf38Q5JPI3 329 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 LVRNQ6Q4G3 990 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 NYAP1Q6ZVC0 841 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 PLA2G15Q8NCC3 412 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 HIC2Q96JB3 615 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 WDR92Q96MX6 357 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 FCRL3Q96P31 734 aaPredicted RBP22.72■■□□□ 1.23
ACTN1-220ENST00000556433 PSKH2Q96QS6 385 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 CCDC3Q9BQI4 270 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 SIRPGQ9P1W8 387 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 SATB2Q9UPW6 733 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 ENTPD2Q9Y5L3 495 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 RP1P56715 2156 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 PTPRQQ9UMZ3 2332 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 BAHCC1Q9P281 2608 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 A8MX80 341 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 CASC3O15234 703 aaKnown RBP22.71■■□□□ 1.23
ACTN1-220ENST00000556433 TCEA3O75764 348 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 TNFP01375 233 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 ELFN1P0C7U0 828 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 AMPD1P23109 780 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 ARL4AP40617 200 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 ERVPABLB-1P60509 514 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 AP1S1P61966 158 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 SMTNL2Q2TAL5 461 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 TMCO4Q5TGY1 634 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 LIPIQ6XZB0 460 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 GKN2Q86XP6 184 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 SDR16C5Q8N3Y7 309 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 ARL10Q8N8L6 244 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 PCDH19Q8TAB3 1148 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 WDR48Q8TAF3 677 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 HSPH1Q92598 858 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 NSMCE3Q96MG7 304 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 ZNF599Q96NL3 588 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.71■■□□□ 1.23
ACTN1-220ENST00000556433 SYNDIG1Q9H7V2 258 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 GPR34Q9UPC5 381 aa22.71■■□□□ 1.23
ACTN1-220ENST00000556433 A0A1W2PNU3 283 aaPredicted RBP22.7■■□□□ 1.22
ACTN1-220ENST00000556433 TTC24A2A3L6 582 aaPredicted RBP22.7■■□□□ 1.22
ACTN1-220ENST00000556433 TRAFD1O14545 582 aaPredicted RBP22.7■■□□□ 1.22
ACTN1-220ENST00000556433 TCF4P15884 667 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 RBMS1P29558 406 aaKnown RBP22.7■■□□□ 1.22
ACTN1-220ENST00000556433 DPYSL2Q16555 572 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 TDRD12Q587J7 1177 aaKnown RBP22.7■■□□□ 1.22
ACTN1-220ENST00000556433 FIGNQ5HY92 759 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 DPPA4Q7L190 304 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 POLNQ7Z5Q5 900 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 ASCL3Q9NQ33 180 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 THSD1Q9NS62 852 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 ETNK2Q9NVF9 386 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 LRRK1Q38SD2 2015 aa22.7■■□□□ 1.22
ACTN1-220ENST00000556433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.69■■□□□ 1.22
ACTN1-220ENST00000556433 CACNB4O00305 520 aaPredicted RBP22.69■■□□□ 1.22
ACTN1-220ENST00000556433 SPIDRQ14159 915 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 ZNF235Q14590 738 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 KCTD16Q68DU8 428 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 TMCO3Q6UWJ1 677 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 GPR155Q7Z3F1 870 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 KYQ8NBH2 561 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 FUBP1Q96AE4 644 aaKnown RBP22.69■■□□□ 1.22
ACTN1-220ENST00000556433 FUCA2Q9BTY2 467 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.69■■□□□ 1.22
ACTN1-220ENST00000556433 DGKBQ9Y6T7 804 aa22.69■■□□□ 1.22
ACTN1-220ENST00000556433 TMEM202A6NGA9 273 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 RARAP10276 462 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 KIAA1024LP59773 190 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 CXADRP78310 365 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 PIGHQ14442 188 aaPredicted RBP22.68■■□□□ 1.22
ACTN1-220ENST00000556433 ACOX1Q15067 660 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 HGSNATQ68CP4 663 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 FOXR1Q6PIV2 292 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 OR56A4Q8NGH8 313 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 OR1E3Q8WZA6 343 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 PDXPQ96GD0 296 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 SLC46A1Q96NT5 459 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 CSPG4P5Q96PW8 444 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 RBM15Q96T37 977 aaKnown RBP eCLIP22.68■■□□□ 1.22
ACTN1-220ENST00000556433 PCDHGC4Q9Y5F7 938 aa22.68■■□□□ 1.22
ACTN1-220ENST00000556433 BZW2Q9Y6E2 419 aaKnown RBP22.68■■□□□ 1.22
ACTN1-220ENST00000556433 PEX11BO96011 259 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 GM2AP17900 193 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 KELP23276 732 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 HSPA9P38646 679 aaKnown RBP22.67■■□□□ 1.22
ACTN1-220ENST00000556433 TPM4P67936 248 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 FANCCQ00597 558 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 BROXQ5VW32 411 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 TXNRD3NBQ6F5E7 133 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 IGF2-ASQ6U949 168 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 BBS5Q8N3I7 341 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 WDR36Q8NI36 951 aaKnown RBP22.67■■□□□ 1.22
ACTN1-220ENST00000556433 PDCD6IPQ8WUM4 868 aaKnown RBP22.67■■□□□ 1.22
ACTN1-220ENST00000556433 KCNE4Q8WWG9 221 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 CCDC74AQ96AQ1 378 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 PRR11Q96HE9 360 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms