RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PAF1Q8N7H5 531 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 APOBEC4Q8WW27 367 aaKnown RBP14.02□□□□□ -0.17
ACTN1-219ENST00000556432 MIB2Q96AX9 1013 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 ABHD17AQ96GS6 310 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CFAP57Q96MR6 1250 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 ASPSCR1Q9BZE9 553 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 TTYH3Q9C0H2 523 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 MAGEH1Q9H213 219 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 PCDH12Q9NPG4 1184 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 NDFIP2Q9NV92 336 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 KCNK4Q9NYG8 393 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 PCDHGA3Q9Y5H0 932 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 TMEM202A6NGA9 273 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 PRR19A6NJB7 356 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 MPSTP25325 297 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 FLT3P36888 993 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 PPP1R2P41236 205 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 SUOXP51687 545 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 ARSDP51689 593 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 STX17P56962 302 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 KIAA1024LP59773 190 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 ATP11AP98196 1134 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 CDC20Q12834 499 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 KLRB1Q12918 225 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 FMR1NBQ8N0W7 255 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-219ENST00000556432 PLA2G15Q8NCC3 412 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 SHC3Q92529 594 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 SLC45A3Q96JT2 553 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 EXOC2Q96KP1 924 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 DDA1Q9BW61 102 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 APEX2Q9UBZ4 518 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 OR12D3Q9UGF7 316 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 DAAM1Q9Y4D1 1078 aa14.01□□□□□ -0.17
ACTN1-219ENST00000556432 GOLGA6L4A6NEF3 574 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
ACTN1-219ENST00000556432 INSIG1O15503 277 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 KDELR3O43731 214 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 KRT7P08729 469 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 RHOQP17081 205 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 MLLT10P55197 1068 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 TRA2AQ13595 282 aaKnown RBP eCLIP14□□□□□ -0.17
ACTN1-219ENST00000556432 UGP2Q16851 508 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 CDO1Q16878 200 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 DCAF12Q5T6F0 453 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 NKAIN2Q5VXU1 208 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 C16orf46Q6P387 395 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 KDELC2Q7Z4H8 507 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 SLC47A2Q86VL8 602 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 UNC5BQ8IZJ1 945 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 TMEM35BQ8NCS4 154 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 ZDHHC1Q8WTX9 485 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
ACTN1-219ENST00000556432 VOPP1Q96AW1 172 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 C18orf8Q96DM3 657 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 TMEM248Q9NWD8 314 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 ATP6V1DQ9Y5K8 247 aa14□□□□□ -0.17
ACTN1-219ENST00000556432 EFCAB7A8K855 629 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 TEX33O43247 280 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 PRKCGP05129 697 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 PNMA6AP0CW24 399 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 SLC9A1P19634 815 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 CD1CP29017 333 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 SCNN1AP37088 669 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 NOP2P46087 812 aaKnown RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 LIMK2P53671 638 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 RAB15P59190 212 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 ILF3Q12906 894 aaKnown RBP eCLIP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 CLPPQ16740 277 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 C2CD6Q53TS8 623 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 NLRP14Q86W24 1093 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 XYLT1Q86Y38 959 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 TEX19Q8NA77 164 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 OR4D9Q8NGE8 314 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 SPATA20Q8TB22 786 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 CASKIN2Q8WXE0 1202 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 TBC1D31Q96DN5 1066 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 EFHD1Q9BUP0 239 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 WDR26Q9H7D7 661 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 SPATS2LQ9NUQ6 558 aaKnown RBP13.99□□□□□ -0.17
ACTN1-219ENST00000556432 MAN1B1Q9UKM7 699 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 TP53TG5Q9Y2B4 290 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 MFHAS1Q9Y4C4 1052 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 ANKRD36A6QL64 1941 aa13.99□□□□□ -0.17
ACTN1-219ENST00000556432 PRSS38A1L453 326 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 VPS4BO75351 444 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 RECQL5O94762 991 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-219ENST00000556432 ECEL1O95672 775 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 NR1D1P20393 614 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 OAS2P29728 719 aaKnown RBP13.98□□□□□ -0.17
ACTN1-219ENST00000556432 MMP12P39900 470 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
ACTN1-219ENST00000556432 MARSP56192 900 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms