RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 VEGFAP15692 232 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-209ENST00000556353 ARSFP54793 590 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 SLC18A2Q05940 514 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 XKR9Q5GH70 373 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 DENND1BQ6P3S1 775 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 KLHL24Q6TFL4 600 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 DENND6AQ8IWF6 608 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 MB21D2Q8IYB1 491 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-209ENST00000556353 DNAAF1Q8NEP3 725 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 TRIB2Q92519 343 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 RNFT2Q96EX2 444 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 TTC12Q9H892 705 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-209ENST00000556353 IFT80Q9P2H3 777 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-209ENST00000556353 NFS1Q9Y697 457 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 USP32Q8NFA0 1604 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 SPATA31E1Q6ZUB1 1445 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.2□□□□□ -1.58
PRPF39-209ENST00000556353 CRYBG1Q9Y4K1 1723 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 STX16-NPEPL1H3BU86 382 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 STX16O14662 325 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 ADAP00813 363 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 TK1P04183 234 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 F7P08709 466 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-209ENST00000556353 FMO4P31512 558 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 HNF1BP35680 557 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 CENPAP49450 140 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 ACTR2P61160 394 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 PRKG1Q13976 671 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 ZRSR1Q15695 479 aaKnown RBP5.2□□□□□ -1.58
PRPF39-209ENST00000556353 CTXN3Q4LDR2 81 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 PLEKHO1Q53GL0 409 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-209ENST00000556353 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 BRINP3Q76B58 766 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 MON1AQ86VX9 555 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 TMEM57Q8N5G2 664 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 SAMD3Q8N6K7 520 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 ZNF114Q8NC26 417 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 AFG1LQ8WV93 481 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 MPHOSPH6Q99547 160 aaKnown RBP5.2□□□□□ -1.58
PRPF39-209ENST00000556353 GAREM1Q9H706 876 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 MALT1Q9UDY8 824 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 PLCH1Q4KWH8 1693 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 SETD5Q9C0A6 1442 aa5.2□□□□□ -1.58
PRPF39-209ENST00000556353 SAA2-SAA4A0A096LPE2 208 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 VNN2O95498 520 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 CD72P21854 359 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 CHKAP35790 457 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 FBXO43Q4G163 708 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 RHBDF2Q6PJF5 856 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 CCDC105Q8IYK2 499 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 PGBD5Q8N414 524 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 AADATQ8N5Z0 425 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 RFWD2Q8NHY2 731 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 HSPH1Q92598 858 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 BICD1Q96G01 975 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 YME1L1Q96TA2 773 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 PKP4Q99569 1192 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 MMTAG2Q9BU76 263 aaKnown RBP5.19□□□□□ -1.58
PRPF39-209ENST00000556353 TCF7L2Q9NQB0 619 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 SPATS2LQ9NUQ6 558 aaKnown RBP5.19□□□□□ -1.58
PRPF39-209ENST00000556353 ANKRD10Q9NXR5 420 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 OR6C3Q9NZP0 311 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 SUFUQ9UMX1 484 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 PXDNQ92626 1479 aa5.19□□□□□ -1.58
PRPF39-209ENST00000556353 GOLGB1Q14789 3259 aaKnown RBP5.19□□□□□ -1.58
PRPF39-209ENST00000556353 PNPLA6Q8IY17 1366 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 ARHGEF28Q8N1W1 1705 aaKnown RBP5.18□□□□□ -1.58
PRPF39-209ENST00000556353 TRPM3Q9HCF6 1732 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-209ENST00000556353 RGS12O14924 1447 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 TECPR2O15040 1411 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 A0A0B4J293 547 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 hCG_1642624A0A1W2PR95 340 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 MAGEA13PA6NCF6 341 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 PRSS47A8MTI9 375 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 TFPIP10646 304 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 RXRAP19793 462 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 LIFRP42702 1097 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 DDR1Q08345 913 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 DLG1Q12959 904 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 DHX34Q14147 1143 aaKnown RBP5.18□□□□□ -1.58
PRPF39-209ENST00000556353 POSTNQ15063 836 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 PDCD2Q16342 344 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-209ENST00000556353 TUBB8Q3ZCM7 444 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 CHD1LQ86WJ1 897 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 TMEM170AQ8WVE7 144 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 OTULINQ96BN8 352 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 MTBPQ96DY7 904 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 SLC39A13Q96H72 371 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 HES6Q96HZ4 224 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 LRFN5Q96NI6 719 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 IL17FQ96PD4 163 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 FAM167BQ9BTA0 163 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 MYOM2P54296 1465 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 NRXN1Q9ULB1 1477 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 KIF1AQ12756 1690 aa5.18□□□□□ -1.58
PRPF39-209ENST00000556353 NRAPQ86VF7 1730 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 PIK3C2GO75747 1445 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 CCDC194A0A1B0GVG4 234 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms