RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 TMEM110-MUSTN1A8MSY1 372 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 CDRT15L2A8MXV6 281 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 DFFAO00273 331 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 TOR1BO14657 336 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 PALMO75781 387 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 RECQL5O94762 991 aaPredicted RBP13.36□□□□□ -0.27
TGFB3-204ENST00000556285 RASGRP1O95267 797 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
TGFB3-204ENST00000556285 MIPP30301 263 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 SUOXP51687 545 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 SPIDRQ14159 915 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 AGERQ15109 404 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ELOCQ15369 112 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 CFAP58Q5T655 872 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 BROXQ5VW32 411 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ESRP1Q6NXG1 681 aaKnown RBP13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ERAP2Q6P179 960 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 BRAT1Q6PJG6 821 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ZNF571Q7Z3V5 609 aaPredicted RBP13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 SDR16C5Q8N3Y7 309 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ARL10Q8N8L6 244 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 ECHDC3Q96DC8 303 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 WDR92Q96MX6 357 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 TUBGCP5Q96RT8 1024 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 FOXP3Q9BZS1 431 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 FGF22Q9HCT0 170 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
TGFB3-204ENST00000556285 FLNBO75369 2602 aaKnown RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 A0A1W2PQM1 296 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 AGRPO00253 132 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 DDX3XO00571 662 aaKnown RBP eCLIP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 EFSO43281 561 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 DAPK3O43293 454 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 TCEA3O75764 348 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 TNFSF15O95150 251 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 FTLP02792 175 aaPredicted RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 HGFP14210 728 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 TCF4P15884 667 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 HTR1BP28222 390 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 SERPINA4P29622 427 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 HTR7P34969 479 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 CSNK1DP48730 415 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 BLKP51451 505 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 TYRO3Q06418 890 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 MTM1Q13496 603 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 GRM3Q14832 879 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 PTPRRQ15256 657 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 PPP6R3Q5H9R7 873 aaPredicted RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 LIPIQ6XZB0 460 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 CCL4L1Q8NHW4 92 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 GRAMD1AQ96CP6 724 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 CINPQ9BW66 212 aaPredicted RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 ATP13A3Q9H7F0 1226 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 SP110Q9HB58 689 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 EPB41L5Q9HCM4 733 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
TGFB3-204ENST00000556285 PCDHGA8Q9Y5G5 932 aa13.35□□□□□ -0.27
TGFB3-204ENST00000556285 BOD1L1Q8NFC6 3051 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 TRAFD1O14545 582 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 LRCH4O75427 683 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 RPLP0P05388 317 aaKnown RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 ALPIP09923 528 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 SKILP12757 684 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 IL1R2P27930 398 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 SCNN1BP51168 640 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 IL10RBQ08334 325 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 SLC10A7Q0GE19 358 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 CLN3Q13286 438 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 DPYSQ14117 519 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 ASIC2Q16515 512 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 TAF1BQ53T94 588 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 LVRNQ6Q4G3 990 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 Q8N9G6 341 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 TMEM168Q9H0V1 697 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 ATXN7L1Q9ULK2 861 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-204ENST00000556285 MYO18BQ8IUG5 2567 aa13.34□□□□□ -0.27
TGFB3-204ENST00000556285 D6RAR5 112 aa13.33□□□□□ -0.28
TGFB3-204ENST00000556285 PRPSAP2O60256 369 aa13.33□□□□□ -0.28
TGFB3-204ENST00000556285 NOBOXO60393 691 aa13.33□□□□□ -0.28
TGFB3-204ENST00000556285 RNF8O76064 485 aa13.33□□□□□ -0.28
TGFB3-204ENST00000556285 PEX11BO96011 259 aa13.33□□□□□ -0.28
TGFB3-204ENST00000556285 TNFP01375 233 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms