RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ATMINO43313 823 aaPredicted RBP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 TNFSF15O95150 251 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 TNFP01375 233 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 ATP1A3P13637 1013 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 ERCC2P18074 760 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 BCL2L1Q07817 233 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 VAC14Q08AM6 782 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 RALGDSQ12967 914 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 RFTN1Q14699 578 aaPredicted RBP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 TCEA2Q15560 299 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 TAF1BQ53T94 588 aaPredicted RBP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 FOXR1Q6PIV2 292 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 CLEC14AQ86T13 490 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 ARHGAP12Q8IWW6 846 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 ZNF843Q8N446 348 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 AOPEPQ8N6M6 819 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 ARFGAP1Q8N6T3 406 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 OR6C4Q8NGE1 309 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 SNRNP27Q8WVK2 155 aaKnown RBP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 WBP1Q96G27 269 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 PDXPQ96GD0 296 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 LIN37Q96GY3 246 aaPredicted RBP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 PEBP4Q96S96 227 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 RBM15Q96T37 977 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDKN3-209ENST00000556102 PCSK1NQ9UHG2 260 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 RABGEF1Q9UJ41 708 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 DGKBQ9Y6T7 804 aa18.93■□□□□ 0.62
CDKN3-209ENST00000556102 TMEM191CA6NGB0 347 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 DFFAO00273 331 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 TEX33O43247 280 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 RNF8O76064 485 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 RECQL5O94762 991 aaPredicted RBP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 ELFN1P0C7U0 828 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 ZNF135P52742 658 aaPredicted RBP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 KIAA1024LP59773 190 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 CFHR1Q03591 330 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 IL10RBQ08334 325 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 NSUN2Q08J23 767 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 LIPIQ6XZB0 460 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 NYAP1Q6ZVC0 841 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 PSTKQ8IV42 348 aaKnown RBP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 NPWQ8N729 165 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 PAF1Q8N7H5 531 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 PLA2G15Q8NCC3 412 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 FNIP1Q8TF40 1166 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 GFM1Q96RP9 751 aaKnown RBP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 ARHGEF17Q96PE2 2063 aaPredicted RBP18.92■□□□□ 0.62
CDKN3-209ENST00000556102 ZNF462Q96JM2 2506 aa18.92■□□□□ 0.62
CDKN3-209ENST00000556102 AHCTF1Q8WYP5 2266 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 D6RAR5 112 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 TMX2-CTNND1H3BSU7 103 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 CACNB4O00305 520 aaPredicted RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 PRPSAP2O60256 369 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 ITGA2BP08514 1039 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 KELP23276 732 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 MIPP30301 263 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 AP1S1P61966 158 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 POLR2LP62875 67 aaKnown RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 EIF3IQ13347 325 aaKnown RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 PPP6R3Q5H9R7 873 aaPredicted RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 KCTD16Q68DU8 428 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 ARHGAP36Q6ZRI8 547 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 CYP4V2Q6ZWL3 525 aaPredicted RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 GPR156Q8NFN8 814 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 OR56A4Q8NGH8 313 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 OR1E3Q8WZA6 343 aa18.91■□□□□ 0.62
CDKN3-209ENST00000556102 FUBP1Q96AE4 644 aaKnown RBP18.91■□□□□ 0.62
CDKN3-209ENST00000556102 SCN8AQ9UQD0 1980 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 A0A1W2PQM1 296 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 TMEM202A6NGA9 273 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 CAPN8A6NHC0 703 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 TRAFD1O14545 582 aaPredicted RBP18.9■□□□□ 0.62
CDKN3-209ENST00000556102 PLD2O14939 933 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 RPLP0P05388 317 aaKnown RBP18.9■□□□□ 0.62
CDKN3-209ENST00000556102 HOXC4P09017 264 aaPredicted RBP18.9■□□□□ 0.62
CDKN3-209ENST00000556102 GZMAP12544 262 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 HCAR3P49019 387 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 RENBPP51606 427 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 CCL7P80098 99 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 ASIC2Q16515 512 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 CCDC183Q5T5S1 534 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 B3GNT8Q7Z7M8 397 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 LZTR1Q8N653 840 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 PSKH2Q96QS6 385 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.9■□□□□ 0.62
CDKN3-209ENST00000556102 TRIM7Q9C029 511 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 STRADBQ9C0K7 418 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 EPB41L5Q9HCM4 733 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 FGF22Q9HCT0 170 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
CDKN3-209ENST00000556102 SEPT3Q9UH03 358 aa18.9■□□□□ 0.62
CDKN3-209ENST00000556102 TNFRSF10CO14798 259 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 LRCH4O75427 683 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 GM2AP17900 193 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TRIM23P36406 574 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 SCNN1BP51168 640 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms