RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TEX33O43247 280 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 ZW10O43264 779 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 HTRA2O43464 458 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SOCS5O75159 536 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 MPOP05164 745 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 GLB1P16278 677 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 ITIH2P19823 946 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CR2P20023 1033 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CES1P23141 567 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 MIPP30301 263 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 MMP12P39900 470 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TMPRSS3P57727 454 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 KIAA1024LP59773 190 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SRP54P61011 504 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TYRO3Q06418 890 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 C1orf61Q13536 156 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SPIDRQ14159 915 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PIGHQ14442 188 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 NR1I3Q14994 352 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 IRF4Q15306 451 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 DPYSL2Q16555 572 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 LEKR1Q6ZMV7 388 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 DPPA4Q7L190 304 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CLEC14AQ86T13 490 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CAMK1DQ8IU85 385 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 ARHGAP12Q8IWW6 846 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 RBFAQ8N0V3 343 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TSEN2Q8NCE0 465 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 GPR156Q8NFN8 814 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 KCNE4Q8WWG9 221 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SYN2Q92777 582 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PRR11Q96HE9 360 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TMEM74Q96NL1 305 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC3Q9BQI4 270 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 WRAP53Q9BUR4 548 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SNRNP25Q9BV90 132 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CINPQ9BW66 212 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TCEAL2Q9H3H9 227 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 HAUS4Q9H6D7 363 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 TAS2R14Q9NYV8 317 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CNOT8Q9UFF9 292 aaKnown RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 ACSL6Q9UKU0 697 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PNMA8BQ9ULN7 279 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PPIL1Q9Y3C6 166 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PCDHGA7Q9Y5G6 932 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 BPTFQ12830 3046 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 FAM170AA1A519 330 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 LRRC53A6NM62 1247 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 H3BRJ5 948 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 MUSKO15146 869 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 NUDT21O43809 227 aaKnown RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 LRCH4O75427 683 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 RECQL5O94762 991 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 PIGNO95427 931 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ITGA2BP08514 1039 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 MYF5P13349 255 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 CCKBRP32239 447 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 SERPINB6P35237 376 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ARL4AP40617 200 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF165P49910 485 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 SCNN1BP51168 640 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 KLHL30Q0D2K2 578 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC173Q0VFZ6 552 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 RALGDSQ12967 914 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 DPYSQ14117 519 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ASIC2Q16515 512 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 CA9Q16790 459 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ALG11Q2TAA5 492 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 PNCKQ6P2M8 343 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 CYP4V2Q6ZWL3 525 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF571Q7Z3V5 609 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 POLNQ7Z5Q5 900 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 HID1Q8IV36 788 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 NDUFAF2Q8N183 169 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 NIPA2Q8N8Q9 360 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 OR56A4Q8NGH8 313 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 TEKT4Q8WW24 435 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 TSACCQ96A04 125 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 NUDCD1Q96RS6 583 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 KCTD15Q96SI1 283 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 STRADBQ9C0K7 418 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 LRRN3Q9H3W5 708 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 SP110Q9HB58 689 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 TRNAU1APQ9NX07 287 aaKnown RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 CWC15Q9P013 229 aaKnown RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 RCOR3Q9P2K3 495 aaPredicted RBP7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 KLQ9UEF7 1012 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 PCSK1NQ9UHG2 260 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 AMACRQ9UHK6 382 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 SATB2Q9UPW6 733 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 IGSF10Q6WRI0 2623 aa7.82□□□□□ -1.16
PTCSC3-201ENST00000556013 ITPR1Q14643 2758 aa7.81□□□□□ -1.16
PTCSC3-201ENST00000556013 A0A1W2PQJ5 194 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms