RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ATXN10Q9UBB4 475 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 DKK3Q9UBP4 350 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 VPS28Q9UK41 221 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CYP8B1Q9UNU6 501 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 INVSQ9Y283 1065 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 NFS1Q9Y697 457 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ASPMQ8IZT6 3477 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SPEGQ15772 3267 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RALGAPA1Q6GYQ0 2036 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZSCAN5CA6NGD5 496 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PRR5-ARHGAP8B1AHC4 643 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 J3KR12 359 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 EEF2KO00418 725 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SLC30A4O14863 429 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 AREL1O15033 823 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MUSKO15146 869 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MID1O15344 667 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 WFS1O76024 890 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 HEXIM1O94992 359 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ERCC2P18074 760 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GNAZP19086 355 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ATP6V1C1P21283 382 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ITPKAP23677 461 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ITGB7P26010 798 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PTPN7P35236 360 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CYLC1P35663 651 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ETFBP38117 255 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PAFAH1B1P43034 410 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 NCALDP61601 193 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ARHGAP8P85298 464 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 NSUN2Q08J23 767 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SPEM2Q0P670 501 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GALNT2Q10471 571 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SLC10A2Q12908 348 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SHBQ15464 509 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF284Q2VY69 593 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TDRD12Q587J7 1177 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KCNT1Q5JUK3 1230 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RNF220Q5VTB9 566 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KIAA0895LQ68EN5 471 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 NEK5Q6P3R8 708 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TMEM154Q6P9G4 183 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DCUN1D2Q6PH85 259 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LINGO4Q6UY18 593 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ARHGAP36Q6ZRI8 547 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 Q6ZVU0 165 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LPCAT2Q7L5N7 544 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 VPS36Q86VN1 386 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LCA5Q86VQ0 697 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KLHDC8BQ8IXV7 354 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PGBD5Q8N414 524 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TMEM145Q8NBT3 493 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PCDH19Q8TAB3 1148 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 IFT81Q8WYA0 676 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TSGA13Q96PP4 275 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF317Q96PQ6 595 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CATSPERBQ9H7T0 1116 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SEPT11Q9NVA2 429 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GALNT8Q9NY28 637 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SLC25A13Q9UJS0 675 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ANAPC7Q9UJX3 599 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TMCO1Q9UM00 188 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZFR2Q9UPR6 939 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PPIL1Q9Y3C6 166 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 HYOU1Q9Y4L1 999 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DUSP10Q9Y6W6 482 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ESYT3A0FGR9 886 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MACROD2A1Z1Q3 448 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 A8MUI8 341 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 WNT9AO14904 365 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 HTRA2O43464 458 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PRPSAP2O60256 369 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SYNCRIPO60506 623 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RAMP2O60895 175 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TMCC1O94876 653 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 WNT1P04628 370 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KRT16P08779 473 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF883P0CG24 379 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 EPHB2P29323 1055 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CHRNA3P32297 505 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 HSD17B3P37058 310 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MSH2P43246 934 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RGRP47804 291 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PPP2CBP62714 309 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PPP2CAP67775 309 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GUCY2DQ02846 1103 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RPL6Q02878 288 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CREB5Q02930 508 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PPARDQ03181 441 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LMNB2Q03252 620 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF33AQ06730 810 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KLC1Q07866 573 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 IL10RBQ08334 325 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF844Q08AG5 666 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 KIF5AQ12840 1032 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms