RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3FA6NER0 549 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 LRRC72A6NJI9 287 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 METTL12A8MUP2 240 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3LB9A6J9 549 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 AREL1O15033 823 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 HTRA2O43464 458 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 NEBLO76041 1014 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 FSBPO95073 299 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 FGGP02679 453 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 PRKCGP05129 697 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 PDHA1P08559 390 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3HP0C7X1 549 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 MAPK8P45983 427 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 GNG11P61952 73 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 SEMG2Q02383 582 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 CREB5Q02930 508 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 GRM3Q14832 879 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 UGP2Q16851 508 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TEX44Q53QW1 395 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 RALGPS1Q5JS13 557 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 SPDYCQ5MJ68 293 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 LYSMD4Q5XG99 296 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 KIAA0895LQ68EN5 471 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3GQ6DHY5 549 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3CQ6IPX1 549 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 FBXL19Q6PCT2 694 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 DARS2Q6PI48 645 aaKnown RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 CDKL3Q8IVW4 592 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 TBC1D3Q8IZP1 549 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 ZNF567Q8N184 647 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 DCLK2Q8N568 766 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 CADM4Q8NFZ8 388 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 HCAR2Q8TDS4 363 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 C1orf54Q8WWF1 131 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 ATG4AQ8WYN0 398 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 BIRC7Q96CA5 298 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 LOXL4Q96JB6 756 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TEKT5Q96M29 485 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 SMIM14Q96QK8 99 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 ORAI3Q9BRQ5 295 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 ARRDC1-AS1Q9H2J1 176 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 SMOC1Q9H4F8 434 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 USP29Q9HBJ7 922 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 GLOD4Q9HC38 313 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 TMEM74BQ9NUR3 256 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 DNPEPQ9ULA0 475 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 RAB23Q9ULC3 237 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 ZFR2Q9UPR6 939 aaKnown RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.04□□□□□ -0.96
CHD8-210ENST00000555962 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 FADS3Q9Y5Q0 445 aa9.04□□□□□ -0.96
CHD8-210ENST00000555962 A0A1W2PQU0 124 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 MEI4A8MW99 385 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 UPK3BL1B0FP48 263 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 UPK3BL2E5RIL1 263 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 F5H423 210 aaPredicted RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 KCNN4O15554 427 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 AP1G1O43747 822 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 FZD6O60353 706 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 RNGTTO60942 597 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 SOCS5O75159 536 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PCDH8O95206 1070 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 RETP07949 1114 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 NFKB1P19838 968 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 MAT2AP31153 395 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 CD86P42081 329 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PTPRRQ15256 657 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 OASLQ15646 514 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 CCDC6Q16204 474 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 SEL1L3Q68CR1 1132 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 BRAT1Q6PJG6 821 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 SPATA22Q8NHS9 363 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 COG1Q8WTW3 980 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PDCD6IPQ8WUM4 868 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 PIH1D2Q8WWB5 315 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 DNASE2BQ8WZ79 361 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PIGKQ92643 395 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 KLK6Q92876 244 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 RAB7BQ96AH8 199 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 TADA1Q96BN2 335 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 IMP4Q96G21 291 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 MS4A14Q96JA4 679 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 OSBPL9Q96SU4 736 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 RBM15Q96T37 977 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD8-210ENST00000555962 TDRD1Q9BXT4 1180 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 PCED1AQ9H1Q7 454 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 SLC25A51Q9H1U9 297 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PREBQ9HCU5 417 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PARD6AQ9NPB6 346 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 PCDH12Q9NPG4 1184 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 SMARCAL1Q9NZC9 954 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 NCDNQ9UBB6 729 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 EIF2B4Q9UI10 523 aaKnown RBP9.03□□□□□ -0.96
CHD8-210ENST00000555962 PILRBQ9UKJ0 227 aa9.03□□□□□ -0.96
CHD8-210ENST00000555962 SNX12Q9UMY4 172 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms