RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MYF5P13349 255 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 KELP23276 732 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 ITPKBP27987 946 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 TRIM23P36406 574 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 PBX1P40424 430 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 ARL4AP40617 200 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 UCNP55089 124 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 GABREP78334 506 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 TLE3Q04726 772 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 RALGDSQ12967 914 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 LBRQ14739 615 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 HGSNATQ68CP4 663 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 LIPIQ6XZB0 460 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 GKN2Q86XP6 184 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 LRRC49Q8IUZ0 686 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 TEKT4Q8WW24 435 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 WDR92Q96MX6 357 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.371e-17■■■■■ 43.3
HNRNPC-221ENST00000555883 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 THSD1Q9NS62 852 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 RCOR3Q9P2K3 495 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 PADI4Q9UM07 663 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 MYLKQ15746 1914 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 NTN3O00634 580 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 MUSKO15146 869 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 RECQL5O94762 991 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 PEX11BO96011 259 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 MPOP05164 745 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 ELFN1P0C7U0 828 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 CTSEP14091 401 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 CR2P20023 1033 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 NFKBIAP25963 317 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 IL1R2P27930 398 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 SERPINB6P35237 376 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 TPM4P67936 248 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 SKOR1P84550 965 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 C1orf61Q13536 156 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 CSPG4P5Q96PW8 444 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 MGME1Q9BQP7 344 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 DPH1Q9BZG8 443 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 KLQ9UEF7 1012 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 DOLKQ9UPQ8 538 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 OR1A2Q9Y585 309 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 ENTPD2Q9Y5L3 495 aa12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-221ENST00000555883 TMX2-CTNND1H3BSU7 103 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CACNB4O00305 520 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 PDE2AO00408 941 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 MAFKO60675 156 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 TNFP01375 233 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 SERPING1P05155 500 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 PNLIPP16233 465 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 SCNN1BP51168 640 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CDH6P55285 790 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 ZBED6P86452 979 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 SLC10A7Q0GE19 358 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 ZNF235Q14590 738 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 TDRD12Q587J7 1177 aaKnown RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 PERM1Q5SV97 790 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 ENPP7Q6UWV6 458 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 HID1Q8IV36 788 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CBARPQ8N350 705 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 FAM71BQ8TC56 605 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CRELD1Q96HD1 420 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 LGMNQ99538 433 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 CCDC3Q9BQI4 270 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 IP6K2Q9UHH9 426 aa12.75□□□□□ -0.37
HNRNPC-221ENST00000555883 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PSMD11O00231 422 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 ATXN7O15265 892 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PCCBP05166 539 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 CYP1A2P05177 515 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 RARAP10276 462 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 SKILP12757 684 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 GM2AP17900 193 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 TEAD1P28347 426 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PDX1P52945 283 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 SLC25A11Q02978 314 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms