RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	DUSP28	Q4G0W2	176 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	RILPL1	Q5EBL4	403 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	WASHC2D	Q5SRD0	308 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	MANEA	Q5SRI9	462 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	TRAPPC11	Q7Z392	1133 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	CTU1	Q7Z7A3	348 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	HAPLN4	Q86UW8	402 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	TMEM199	Q8N511	208 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	SRBD1	Q8N5C6	995 aa	Known RBP	4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	CCDC89	Q8N998	374 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	HUS1B	Q8NHY5	278 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	POMGNT1	Q8WZA1	660 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	ISCU	Q9H1K1	167 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	SH2D4A	Q9H788	454 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	CYSLTR2	Q9NS75	346 aa		4.82	□□□□□ -1.64
KTN1-223	ENST00000555573	WDR91	A4D1P6	747 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573		A8MZ25	164 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	MCM3	P25205	808 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	THPO	P40225	353 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	PSMB10	P40306	273 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ME1	P48163	572 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ACVR2B	Q13705	512 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	IRF3	Q14653	427 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ETFDH	Q16134	617 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ZNF284	Q2VY69	593 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	CHST9	Q7L1S5	443 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	CCDC13	Q8IYE1	715 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ZBTB2	Q8N680	514 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	ERGIC1	Q969X5	290 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	SLC25A28	Q96A46	364 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	APOLD1	Q96LR9	279 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	GFM1	Q96RP9	751 aa	Known RBP	4.81	□□□□□ -1.64
KTN1-223	ENST00000555573	NFE2L3	Q9Y4A8	694 aa		4.81	□□□□□ -1.64
KTN1-223	ENST00000555573		H0YGN5	161 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	FIBP	O43427	364 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	RASSF2	P50749	326 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CDH8	P55286	799 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PRAME	P78395	509 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SORD	Q00796	357 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CRYM	Q14894	314 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PTGR1	Q14914	329 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SHB	Q15464	509 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	COLEC12	Q5KU26	742 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PXDC1	Q5TGL8	231 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	DCAF12L2	Q5VW00	463 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	TMEM154	Q6P9G4	183 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SARM1	Q6SZW1	724 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	ENOSF1	Q7L5Y1	443 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SFTPA2	Q8IWL1	248 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	C7orf57	Q8NEG2	295 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	BEST2	Q8NFU1	509 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	TMEM163	Q8TC26	289 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	DENND1A	Q8TEH3	1009 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	LPAR1	Q92633	364 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	RPL36AL	Q969Q0	106 aa	Known RBP	4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	RANGRF	Q9HD47	186 aa	Predicted RBP	4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CISD1	Q9NZ45	108 aa	Known RBP	4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PCDHGB4	Q9UN71	923 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CEPT1	Q9Y6K0	416 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	LY6G6E	A0A0G2JKS1	128 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	IGLV5-39	A0A0G2JS06	123 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	MMP2	P08253	660 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CLTB	P09497	229 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CSH1	P0DML2	217 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CSH2	P0DML3	217 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	GNLY	P22749	145 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	MYF6	P23409	242 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	ACSL1	P33121	698 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CLCN3	P51790	818 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	TRAF1	Q13077	416 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CHAF1B	Q13112	559 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	GPR18	Q14330	331 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	C2orf68	Q2NKX9	166 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573		Q6ZSV7	163 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PATL1	Q86TB9	770 aa	Known RBP	4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	ADGRF2	Q8IZF7	708 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	ARRDC2	Q8TBH0	407 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	ARHGEF26	Q96DR7	871 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PPP1R13B	Q96KQ4	1090 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	NLRP4	Q96MN2	994 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SLITRK1	Q96PX8	696 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	FOXP1	Q9H334	677 aa	Predicted RBP	4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	SMARCAD1	Q9H4L7	1026 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	PDZD7	Q9H5P4	517 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	CLIC5	Q9NZA1	410 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	NRBP1	Q9UHY1	535 aa		4.8	□□□□□ -1.64
KTN1-223	ENST00000555573	KDM4E	B2RXH2	506 aa	Predicted RBP	4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	ZNF182	P17025	639 aa	Predicted RBP	4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	FBL	P22087	321 aa	Known RBP	4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	RAD52	P43351	418 aa		4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	RFX5	P48382	616 aa	Predicted RBP	4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	PMS2	P54278	862 aa		4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	SNX16	P57768	344 aa		4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	MYBPC2	Q14324	1141 aa		4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	PRTG	Q2VWP7	1150 aa		4.79	□□□□□ -1.64
KTN1-223	ENST00000555573	USP41	Q3LFD5	358 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms