RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LYSMD1Q96S90 227 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 TBL1YQ9BQ87 522 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FICDQ9BVA6 458 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 GPR174Q9BXC1 333 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 B4GALT6Q9UBX8 382 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 MBD1Q9UIS9 605 aaPredicted RBP14.35□□□□□ -0.11
CHD8-208ENST00000555301 KMT2EQ8IZD2 1858 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 ATG2BQ96BY7 2078 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 AP3B1O00203 1094 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 TTI1O43156 1089 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 SPINT1O43278 529 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 RHOBTB1O94844 696 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 PRKCGP05129 697 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 CTPS1P17812 591 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 TPSB2P20231 275 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 VIPR1P32241 457 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 HNF1BP35680 557 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 CCR5P51681 352 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 RPS21P63220 83 aaKnown RBP14.34□□□□□ -0.11
CHD8-208ENST00000555301 SARNPP82979 210 aaKnown RBP14.34□□□□□ -0.11
CHD8-208ENST00000555301 ARHGEF7Q14155 803 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 ELF2Q15723 593 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 SIRPB2Q5JXA9 342 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 LPCAT2Q7L5N7 544 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 TRIM69Q86WT6 500 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 DUSP15Q9H1R2 295 aaPredicted RBP14.34□□□□□ -0.11
CHD8-208ENST00000555301 C6orf106Q9H6K1 298 aaPredicted RBP14.34□□□□□ -0.11
CHD8-208ENST00000555301 L2HGDHQ9H9P8 463 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 ARNT2Q9HBZ2 717 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 MAGEE1Q9HCI5 957 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 ITM2BQ9Y287 266 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
CHD8-208ENST00000555301 A0A1W2PQU0 124 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 PRR23AA6NEV1 266 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 NPIPB15A6NHN6 443 aaPredicted RBP14.33□□□□□ -0.12
CHD8-208ENST00000555301 NDC80O14777 642 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 RAD51CO43502 376 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 RNGTTO60942 597 aaKnown RBP14.33□□□□□ -0.12
CHD8-208ENST00000555301 ALPIP09923 528 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 ELFN1P0C7U0 828 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 ZNF30P17039 623 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 ITIH2P19823 946 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 BCKDHBP21953 392 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 NUDT1P36639 197 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 MAGEA6P43360 314 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 CHRNA4P43681 627 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 CDH17Q12864 832 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 SRSF5Q13243 272 aaKnown RBP14.33□□□□□ -0.12
CHD8-208ENST00000555301 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
CHD8-208ENST00000555301 SPARCL1Q14515 664 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 KIAA0895LQ68EN5 471 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 C8orf74Q6P047 294 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 PPP1R21Q6ZMI0 780 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 HORMAD1Q86X24 394 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 MMGT1Q8N4V1 131 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 ZC3H10Q96K80 434 aaKnown RBP14.33□□□□□ -0.12
CHD8-208ENST00000555301 APOL2Q9BQE5 337 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 TRABDQ9H4I3 376 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 HACD3Q9P035 362 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 SHROOM3Q8TF72 1996 aa14.33□□□□□ -0.12
CHD8-208ENST00000555301 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 METTL12A8MUP2 240 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 EFCAB8A8MWE9 144 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 C10orf142B7Z368 130 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 PSMD11O00231 422 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 DNALI1O14645 258 aaPredicted RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 USP12O75317 370 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 HEXIM1O94992 359 aaKnown RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 FSBPO95073 299 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 LIG3P49916 1009 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 RALGDSQ12967 914 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 KCNJ11Q14654 390 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 PLK5Q496M5 336 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 PMS2CLQ68D20 193 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 DENND5AQ6IQ26 1287 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 CRTC1Q6UUV9 634 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 PPIL6Q8IXY8 311 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 RAVER1Q8IY67 606 aaKnown RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 TMEFF1Q8IYR6 380 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 ASB12Q8WXK4 309 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 CPT1BQ92523 772 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 TRIM51Q9BSJ1 452 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 WRAP53Q9BUR4 548 aaKnown RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 CARD6Q9BX69 1037 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 KCTD5Q9NXV2 234 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 GGT7Q9UJ14 662 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
CHD8-208ENST00000555301 R4GN57 208 aa14.32□□□□□ -0.12
CHD8-208ENST00000555301 C1orf232A0A0U1RR37 186 aa14.31□□□□□ -0.12
CHD8-208ENST00000555301 MEI4A8MW99 385 aa14.31□□□□□ -0.12
CHD8-208ENST00000555301 A8MX80 341 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms