RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 GATA5Q9BWX5 397 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 PREBQ9HCU5 417 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 LIN7AO14910 233 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 GSTA4O15217 222 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 ATP5HO75947 161 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 FGFR3P22607 806 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 RAB10P61026 200 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 ZFP14Q9HCL3 533 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 CD3EAPO15446 510 aaKnown RBP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 PCDH8O95206 1070 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 HIST1H2AGP0C0S8 130 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 LINC00032P0C843 101 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 HIST1H2ADP20671 130 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 MZF1P28698 734 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 PPARGP37231 505 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 STARD3Q14849 445 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 PIGWQ7Z7B1 504 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 FBXO39Q8N4B4 442 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 ARNTL2Q8WYA1 636 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 MED8Q96G25 268 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 HIST1H2AHQ96KK5 128 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 HIST1H2AJQ99878 128 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 H2AFJQ9BTM1 129 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 SPATA16Q9BXB7 569 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 COG4Q9H9E3 785 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 WDR6Q9NNW5 1121 aaKnown RBP12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 ABCB8Q9NUT2 735 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 STOML1Q9UBI4 398 aa12.27□□□□□ -0.44
ARHGEF40-206ENST00000555232 UNC5CO95185 931 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 ESRRBO95718 433 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 MFSD4BQ5TF39 518 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 SCUBE1Q8IWY4 988 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 CYB5D2Q8WUJ1 264 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 ZFYVE19Q96K21 471 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 MRPL1Q9BYD6 325 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 EPS15L1Q9UBC2 864 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 COPG2Q9UBF2 871 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 MAGEB16A2A368 324 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 PLIN3O60664 434 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 PARNO95453 639 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 GOT2P00505 430 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 IL1BP01584 269 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 TPSB2P20231 275 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 CALB2P22676 271 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 GSTT1P30711 240 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 NRG1Q02297 640 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 MBTPS1Q14703 1052 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 TPSAB1Q15661 275 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 AP5B1Q2VPB7 878 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 PITRM1Q5JRX3 1037 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 HERC6Q8IVU3 1022 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 LINC01465Q8N7H1 131 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 CENPTQ96BT3 561 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 RNPEPL1Q9HAU8 725 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 DNAAF2Q9NVR5 837 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 TAS2R13Q9NYV9 303 aa12.27□□□□□ -0.45
ARHGEF40-206ENST00000555232 RPLP2P05387 115 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 PPIDQ08752 370 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 NR6A1Q15406 480 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 STXBP5Q5T5C0 1151 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 SLC44A2Q8IWA5 706 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CLHC1Q8NHS4 586 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 HEXDCQ8WVB3 486 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 SNX19Q92543 992 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CMTM5Q96DZ9 223 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 GPR21Q99679 349 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 SEMA6AQ9H2E6 1030 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 OR2AG2A6NM03 316 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 INPPL1O15357 1258 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 ZNF623O75123 536 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 RHOQP17081 205 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 ATP6V1C1P21283 382 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 PTPN4P29074 926 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 ENPEPQ07075 957 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 TBL3Q12788 808 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 FLOT2Q14254 428 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 SPDYCQ5MJ68 293 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 OR4L1Q8NH43 312 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 KCTD13Q8WZ19 329 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 C2orf49Q9BVC5 232 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CRISPLD1Q9H336 500 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 TCRBV5S1A1TA0A578 114 aa12.26□□□□□ -0.45
ARHGEF40-206ENST00000555232 CCDC162PA2VCL2 907 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms