RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZMPSTE24O75844 475 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 INSRRP14616 1297 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ADORA2AP29274 412 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HNRNPH1P31943 449 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HSD17B2P37059 387 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MAN2A2P49641 1150 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PIK3R6Q5UE93 754 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GALNT5Q7Z7M9 940 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TRPV1Q8NER1 839 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZCCHC10Q8TBK6 192 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HCAR2Q8TDS4 363 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 KAT5Q92993 513 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PPP1R14BQ96C90 147 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 RIT2Q99578 217 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NAT9Q9BTE0 207 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF518BQ9C0D4 1074 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 OSBPL3Q9H4L5 887 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZSCAN5BA6NJL1 495 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PSMB4P28070 264 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MANFP55145 182 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CAV3P56539 151 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NECTIN1Q15223 517 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZBTB46Q86UZ6 589 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TDRD1Q9BXT4 1180 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CDHR2Q9BYE9 1310 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 M0R036 132 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 TPP1O14773 563 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 TSPAN8P19075 237 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CCL23P55773 120 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CCZ1BP86790 482 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CCZ1P86791 482 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CBX3Q13185 183 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 TMED8Q6PL24 325 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 AFTPHQ6ULP2 937 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 OLFML1Q6UWY5 402 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SSX6Q7RTT6 188 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 DCLK3Q9C098 648 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 NYAP2Q9P242 653 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ARHGEF33A8MVX0 844 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 MDM4O15151 490 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SLC25A14O95258 325 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FTH1P02794 183 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FAM153BP0C7A2 387 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CYP11B2P19099 503 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FAM46CQ5VWP2 391 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 LGMNQ99538 433 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ASB8Q9H765 288 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 NEO1Q92859 1461 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ENTPD3O75355 529 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 UBOX5O94941 541 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 RRM1P23921 792 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 HECTD3Q5T447 861 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 OR2AJ1Q8NGZ0 328 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SUN3Q8TAQ9 357 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FAM151AQ8WW52 585 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 KAT2AQ92830 837 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 APOPT1Q96IL0 206 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 RIPOR3Q96MK2 946 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 TKTL2Q9H0I9 626 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 C11orf16Q9NQ32 467 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PCDHA3Q9Y5H8 950 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CDK12Q9NYV4 1490 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FAM86C2PA6NEL3 165 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FAM86B1E9PN63 330 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SMAD9O15198 467 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 LSM8O95777 96 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PPP3R1P63098 170 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 MSLNQ13421 630 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SPIN3Q5JUX0 258 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 FBXO33Q7Z6M2 555 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 NOA1Q8NC60 698 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 LENG9Q96B70 501 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CDRT15Q96T59 188 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ELOVL4Q9GZR5 314 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 GPN1Q9HCN4 374 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SSU72P8A0A1W2PR75 194 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PLOD2O00469 737 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CYP1A1P04798 512 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 APODP05090 189 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF20P17024 532 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 GRIA3P42263 894 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PRKG2Q13237 762 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PSMD5Q16401 504 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 CYB5D1Q6P9G0 228 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 HJURPQ8NCD3 748 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ACTL9Q8TC94 416 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PNPT1Q8TCS8 783 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 PPCDCQ96CD2 204 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 ADAM2Q99965 735 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms