RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 NRLP54845 237 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
SIX1-203ENST00000554986 YWHAEP62258 255 aaKnown RBP13.42□□□□□ -0.26
SIX1-203ENST00000554986 ANKDD1AQ495B1 522 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 LRRTM3Q86VH5 581 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 DEFB123Q8N688 67 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 CDKL2Q92772 493 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 THAP11Q96EK4 314 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 KLHL5Q96PQ7 755 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 CGREF1Q99674 301 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 OLFM1Q99784 485 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 SLC4A5Q9BY07 1137 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 PAIP1Q9H074 479 aaKnown RBP13.42□□□□□ -0.26
SIX1-203ENST00000554986 SNX25Q9H3E2 840 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 WDR41Q9HAD4 459 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 TRPV5Q9NQA5 729 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 GIN1Q9NXP7 522 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
SIX1-203ENST00000554986 EBF1Q9UH73 591 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 MTCH2Q9Y6C9 303 aa13.42□□□□□ -0.26
SIX1-203ENST00000554986 GOLGA8TH3BQL2 631 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 H7C4K7 107 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 MIPP30301 263 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 OR1D2P34982 312 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 ARPP19P56211 112 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 ZNF394Q53GI3 561 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 LYSMD3Q7Z3D4 306 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 RBM23Q86U06 439 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 JOSD2Q8TAC2 188 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 TRUB1Q8WWH5 349 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 SREK1Q8WXA9 508 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 MYLIPQ8WY64 445 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 RPF2Q9H7B2 306 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 CRTAC1Q9NQ79 661 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 FNIP2Q9P278 1114 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 USP18Q9UMW8 372 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 GPC6Q9Y625 555 aaPredicted RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 KCNN4O15554 427 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 HTRA2O43464 458 aaPredicted RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 ZBTB11O95625 1053 aaPredicted RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 APRTP07741 180 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 MLNP12872 115 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 PTPN1P18031 435 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 TMED10P49755 219 aaKnown RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 RHDQ02161 417 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 NHSL2Q5HYW2 709 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 NANOGP8Q6NSW7 305 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 PPP4R4Q6NUP7 873 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 NPNTQ6UXI9 565 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 ANKFN1Q8N957 763 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 MFSD2AQ8NA29 543 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 SLC7A14Q8TBB6 771 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 TFAP2CQ92754 450 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 RNF157Q96PX1 679 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
SIX1-203ENST00000554986 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 ACBD6Q9BR61 282 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 CALN1Q9BXU9 219 aa13.41□□□□□ -0.26
SIX1-203ENST00000554986 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.41□□□□□ -0.26
SIX1-203ENST00000554986 GOLGA8QA0A0J9YX86 632 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 MYBPHLA2RUH7 354 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 GOLGA8OA6NCC3 632 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 OR6C75A6NL08 312 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 ZNF487B1APH4 448 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 GOLGA8NF8WBI6 632 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 SNAP91O60641 907 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 GCATO75600 419 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 VNN2O95498 520 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 HSPA4LO95757 839 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 POU3F3P20264 500 aaPredicted RBP13.4□□□□□ -0.26
SIX1-203ENST00000554986 IGFBP4P22692 258 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 GABRB3P28472 473 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 NDUFV1P49821 464 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 CTBSQ01459 385 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
SIX1-203ENST00000554986 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
SIX1-203ENST00000554986 IL23RQ5VWK5 629 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 ACOT1Q86TX2 421 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 UNC93AQ86WB7 457 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 UNC5BQ8IZJ1 945 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 ZNF781Q8N8C0 355 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
SIX1-203ENST00000554986 EFHD2Q96C19 240 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms