RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GAGE10A6NGK3 116 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 FOXO6A8MYZ6 492 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 KIR2DS3K7RE56 304 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 SPTLC2O15270 562 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 INSIG1O15503 277 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 NEURL1O76050 574 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 RTN3O95197 1032 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DDAH2O95865 285 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TBX18O95935 607 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 F9P00740 461 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 IL1AP01583 271 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 URODP06132 367 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TNFRSF1BP20333 461 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 CD72P21854 359 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 RFC4P35249 363 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 SLC16A2P36021 539 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 POLGP54098 1239 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 GEMIN4P57678 1058 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 NANOS2P60321 138 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ID2Q02363 134 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 PMPCAQ10713 525 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 RRS1Q15050 365 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 PRICKLE4Q2TBC4 344 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 FBXO43Q4G163 708 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 MIDNQ504T8 468 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TTC39AQ5SRH9 613 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 AAGABQ6PD74 315 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 OLFM4Q6UX06 510 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DLK2Q6UY11 383 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DSTYKQ6XUX3 929 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 R3HCC1LQ7Z5L2 792 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 MON1AQ86VX9 555 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DDIASQ8IXT1 998 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 FAR1Q8WVX9 515 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF622Q969S3 477 aaKnown RBP eCLIP1.62□□□□□ -2.155e-7■□□□□ 8.2
PRPF39-208ENST00000554785 KIF1BPQ96EK5 621 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 CAPNS2Q96L46 248 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 C7orf26Q96N11 449 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TEFMQ96QE5 360 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 MPHOSPH8Q99549 860 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 PDCL3Q9H2J4 239 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TTYH1Q9H313 450 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 SLC32A1Q9H598 525 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ACTR5Q9H9F9 607 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 VEZTQ9HBM0 779 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 SEMA4BQ9NPR2 832 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ENTPD7Q9NQZ7 604 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 IL1RAPL1Q9NZN1 696 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 NLKQ9UBE8 527 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 FBXO40Q9UH90 709 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 NAALADL1Q9UQQ1 740 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 CLDN16Q9Y5I7 305 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 POLR3AO14802 1390 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ROCK1Q13464 1354 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 MAP2P11137 1827 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 SLX4Q8IY92 1834 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 RPGRIP1LQ68CZ1 1315 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ITIH6Q6UXX5 1313 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 PAPPA2Q9BXP8 1791 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 BCL9O00512 1426 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 FER1L6Q2WGJ9 1857 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD31Q8N7Z5 1873 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 WDFY3Q8IZQ1 3526 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 COL5A3P25940 1745 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD26Q9UPS8 1709 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TRBV5-3A0A0A0MS03 114 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TRBV5-7A0A0A0MS05 114 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 C17orf113A0A1B0GUU1 675 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 A0A1W2PPH5 198 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TCERG1O14776 1098 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CEP104O60308 925 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TMCC1O94876 653 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ADAP00813 363 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SERPINC1P01008 464 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PSG1P11464 419 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 COX7A2P14406 83 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TKTP29401 623 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 EFNB1P98172 346 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 MAP2K1Q02750 393 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 LMOD3Q0VAK6 560 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PTP4A2Q12974 167 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ITPK1Q13572 414 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SIM2Q14190 667 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ALG10Q5BKT4 473 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ALG10BQ5I7T1 473 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 FAM180BQ6P0A1 224 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 C17orf99Q6UX52 265 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 IL20RBQ6UXL0 311 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF793Q6ZN11 406 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 DEF8Q6ZN54 512 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 C1orf122Q6ZSJ8 110 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 H1FNTQ75WM6 255 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 B4GALNT4Q76KP1 1039 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PRSS45Q7RTY3 260 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 WDR5BQ86VZ2 330 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CHD1LQ86WJ1 897 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PELI3Q8N2H9 469 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CPXM2Q8N436 756 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms