RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PPP3CCP48454 512 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 BLKP51451 505 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 PSMC6P62333 389 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 YWHAZP63104 245 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CAPSQ13938 189 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 FGFBP1Q14512 234 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 WTAPQ15007 396 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 HSPB2Q16082 182 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 DUSP28Q4G0W2 176 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 WASHC2DQ5SRD0 308 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 MFSD4BQ5TF39 518 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 GKAP1Q5VSY0 366 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 ATG9BQ674R7 924 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 TXNDC8Q6A555 127 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 NCEH1Q6PIU2 408 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CPLX2Q6PUV4 134 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CRELD2Q6UXH1 353 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SLC16A12Q6ZSM3 486 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CTU1Q7Z7A3 348 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 TBC1D26Q86UD7 250 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SRBD1Q8N5C6 995 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 B4GALNT2Q8NHY0 566 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 GABPB2Q8TAK5 448 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SCFD2Q8WU76 684 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 ASB5Q8WWX0 329 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 FAM120BQ96EK7 910 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 MMABQ96EY8 250 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 POLDIP3Q9BY77 421 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 ISCUQ9H1K1 167 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SYNCQ9H7C4 482 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 KAT14Q9H8E8 782 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 MRPL44Q9H9J2 332 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 FBRSL1Q9HCM7 1045 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 KRCC1Q9NPI7 259 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SLC6A13Q9NSD5 602 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 PLK2Q9NYY3 685 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 LSM4Q9Y4Z0 139 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 LYVE1Q9Y5Y7 322 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 A0A1W2PQ09 198 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 FRMD3A2A2Y4 597 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 TNFRSF13BO14836 293 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 BCAT2O15382 392 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 PAGE4O60829 102 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 NKX2-2O95096 273 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 STARD3NLO95772 234 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 LCATP04180 440 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 HSP90AA1P07900 732 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CSH1P0DML2 217 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CSH2P0DML3 217 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 KRT10P13645 584 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ZNF8P17098 575 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CTPS1P17812 591 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 GNLYP22749 145 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 MCM3P25205 808 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 GCH1P30793 250 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ARRB2P32121 409 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 DCTDP32321 178 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 RYKP34925 604 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 AVPR1AP37288 418 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 RFX2P48378 723 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 RFX5P48382 616 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CENPAP49450 140 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CXCR3P49682 368 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 F2RL1P55085 397 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 HDAC4P56524 1084 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 GOLGA8DPQ0D2H9 430 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 TRAF1Q13077 416 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CHAF1BQ13112 559 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 IRF3Q14653 427 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 DPCR1Q3MIW9 517 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 HEPHL1Q6MZM0 1159 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 FBXO46Q6PJ61 603 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 FAM83HQ6ZRV2 1179 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 Q6ZSV7 163 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 HAPLN4Q86UW8 402 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 TMC8Q8IU68 726 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CAMK1DQ8IU85 385 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CCDC13Q8IYE1 715 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ZCCHC9Q8N567 271 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CEP76Q8TAP6 659 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 TMEM170AQ8WVE7 144 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ARHGEF2Q92974 986 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 NSUN4Q96CB9 384 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 CALML4Q96GE6 196 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ZC3HAV1LQ96H79 300 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 ZNF333Q96JL9 665 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 SIN3AQ96ST3 1273 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 SRSF8Q9BRL6 282 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 H2AFJQ9BTM1 129 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 RBM38Q9H0Z9 239 aaKnown RBP3.23□□□□□ -1.89
SCFD1-213ENST00000554776 SMARCAD1Q9H4L7 1026 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 PLEKHA4Q9H4M7 779 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 MVB12BQ9H7P6 319 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 PLAC1Q9HBJ0 212 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 RRP7BPQ9NSQ0 103 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 NSMCE4AQ9NXX6 385 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 NCKIPSDQ9NZQ3 722 aa3.23□□□□□ -1.89
SCFD1-213ENST00000554776 HAO1Q9UJM8 370 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms