RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GSRP00390 522 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 FTH1P19P0C7X4 201 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 TCF4P15884 667 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 PCK1P35558 622 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 GJC1P36383 396 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 KCNJ1P48048 391 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 ARRB1P49407 418 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-214ENST00000554604 CAV1Q03135 178 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 RAD51Q06609 339 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
SHMT2-214ENST00000554604 TAZQ16635 292 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 TFDP3Q5H9I0 405 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 PRAMEF14Q5SWL7 426 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 MFSD7Q6UXD7 560 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 IQCHQ86VS3 1027 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 HORMAD1Q86X24 394 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 OR6K2Q8NGY2 324 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 KLK6Q92876 244 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-214ENST00000554604 HMCESQ96FZ2 354 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 LRIG1Q96JA1 1093 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 MYOCQ99972 504 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 NCAPGQ9BPX3 1015 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 FRMD8P1Q9BZ68 369 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-214ENST00000554604 NOL6Q9H6R4 1146 aaKnown RBP12.57□□□□□ -0.4
SHMT2-214ENST00000554604 PLAAQ9Y263 795 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 NEU2Q9Y3R4 380 aa12.57□□□□□ -0.4
SHMT2-214ENST00000554604 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 RNF103O00237 685 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 NEMP1O14524 444 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 YKT6O15498 198 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 TMCC1O94876 653 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 IGSF6O95976 241 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ITGAVP06756 1048 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ADRB3P13945 408 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ITIH2P19823 946 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 MIPP30301 263 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 AKT2P31751 481 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 GKP32189 559 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 CDKN2BP42772 138 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 PLTPP55058 493 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 NXPH1P58417 271 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 RHOAP61586 193 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 DMTNQ08495 405 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 OVGP1Q12889 678 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 CALCOCO2Q13137 446 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SERINC3Q13530 473 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SNX1Q13596 522 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 MYLK3Q32MK0 819 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ATP13A4Q4VNC1 1196 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ZNF805Q5CZA5 627 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 PPP6R3Q5H9R7 873 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ATXN7L2Q5T6C5 722 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 DBX2Q6ZNG2 339 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 UMODL1-AS1Q8N2C9 162 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 OXR1Q8N573 874 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ARFGAP1Q8N6T3 406 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 FBXO25Q8TCJ0 367 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 CCHCR1Q8TD31 782 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 KLHDC7BQ96G42 594 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SNF8Q96H20 258 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SNRNP25Q9BV90 132 aaKnown RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 DRG1Q9Y295 367 aaKnown RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 BTBD3Q9Y2F9 522 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 R3HDM2Q9Y2K5 976 aaKnown RBP12.56□□□□□ -0.4
SHMT2-214ENST00000554604 NFS1Q9Y697 457 aa12.56□□□□□ -0.4
SHMT2-214ENST00000554604 SPEGQ15772 3267 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 C3orf70A6NLC5 250 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-214ENST00000554604 GOLGA8CPA6NN73 597 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 C16orf96A6NNT2 1141 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 LIASO43766 372 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 UGT2B4P06133 528 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 HNRNPA2B1P22626 353 aaKnown RBP12.55□□□□□ -0.4
SHMT2-214ENST00000554604 NDST2P52849 883 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 PMS2P54278 862 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 GYS2P54840 703 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 RPS21P63220 83 aaKnown RBP12.55□□□□□ -0.4
SHMT2-214ENST00000554604 LLGL1Q15334 1064 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 CA9Q16790 459 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 INO80DQ53TQ3 878 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-214ENST00000554604 TXNRD3NBQ6F5E7 133 aa12.55□□□□□ -0.4
SHMT2-214ENST00000554604 KIAA1161Q6NSJ0 714 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms