RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LAMA5O15230 3695 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SPAG17Q6Q759 2223 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 MEI4A8MW99 385 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 H3BML4 177 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 PLK4O00444 970 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 HOXC11O43248 304 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SLC26A4O43511 780 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 TOX4O94842 621 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 IL18RAPO95256 599 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 MYL1P05976 194 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 C1SP09871 688 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 PLA2G4BP0C869 781 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ANXA13P27216 316 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ECHS1P30084 290 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 RPS19P39019 145 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 GRK6P43250 576 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ACOT2P49753 483 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ZNF132P52740 706 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 BNC1Q01954 994 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 MAPRE1Q15691 268 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 TAF1BQ53T94 588 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ADALQ6DHV7 355 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 DHRS13Q6UX07 377 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 POLNQ7Z5Q5 900 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 LURAP1LQ8IV03 231 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 DENND1CQ8IV53 801 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 RHOT1Q8IXI2 618 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ZCCHC9Q8N567 271 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 MYCT1Q8N699 235 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NECAB1Q8N987 351 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NSUN7Q8NE18 718 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 CACTINQ8WUQ7 758 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SCFD1Q8WVM8 642 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 FGF11Q92914 225 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 RAB24Q969Q5 203 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SLC7A6OSQ96CW6 309 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NXPE2Q96DL1 559 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 MRGPRX1Q96LB2 322 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 OR14A2Q96R54 314 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 DMRTA2Q96SC8 542 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 ACOX2Q99424 681 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 GABRG3Q99928 467 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NUP58Q9BVL2 599 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SARGQ9BW04 601 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 GPR174Q9BXC1 333 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 C12orf65Q9H3J6 166 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NELFAQ9H3P2 528 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 GDAP2Q9NXN4 497 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 WSB2Q9NYS7 404 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 PLA2G3Q9NZ20 509 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 WDR35Q9P2L0 1181 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 TRPS1Q9UHF7 1281 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 NOL7Q9UMY1 257 aaKnown RBP5.11□□□□□ -1.59
ATXN3-228ENST00000554592 L1RE1Q9UN81 338 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 AGAP1Q9UPQ3 857 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 PCDHGA1Q9Y5H4 931 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 AKAP13Q12802 2813 aa5.11□□□□□ -1.59
ATXN3-228ENST00000554592 A0A1B0GVT2 93 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 LAD1O00515 517 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 B3GALT2O43825 422 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 ITGA10O75578 1167 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 TUSC2O75896 110 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 UBXN7O94888 489 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 ENDOD1O94919 500 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 OAS1P00973 400 aaKnown RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 MBL2P11226 248 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 ACO1P21399 889 aaKnown RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 BDNFP23560 247 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 HNF1BP35680 557 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 PRPHP41219 470 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 MAP2K6P52564 334 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 SLC12A3P55017 1021 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 WNT3AP56704 352 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 BPIFB4P59827 614 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 NOP14P78316 857 aaKnown RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 RBP5P82980 135 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 GTF2BQ00403 316 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 GUCY1B3Q02153 619 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 RHDQ02161 417 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 SEMG2Q02383 582 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 TAF10Q12962 218 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 STARD3Q14849 445 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 POSTNQ15063 836 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 LLGL1Q15334 1064 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 ZRSR1Q15695 479 aaKnown RBP5.1□□□□□ -1.59
ATXN3-228ENST00000554592 IL17AQ16552 155 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 ME3Q16798 604 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 KIF19Q2TAC6 998 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 CCDC157Q569K6 752 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 HYIQ5T013 277 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 DCAF12L1Q5VU92 463 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 SLC39A4Q6P5W5 647 aa5.1□□□□□ -1.59
ATXN3-228ENST00000554592 CRIP3Q6Q6R5 217 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms