RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CAPN9O14815 690 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 IRAK2O43187 625 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 MSI1O43347 362 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 LRCH4O75427 683 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 FGF19O95750 216 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 OLFM2O95897 454 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TRUB2O95900 331 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 FTCDO95954 541 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 SRGAP2BP0DMP2 458 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 FOSL2P15408 326 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TCF4P15884 667 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CEBPBP17676 345 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 COMTP21964 271 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 IL1R2P27930 398 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 MAN1A1P33908 653 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 SULT1E1P49888 294 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TUBP50607 506 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 NAP1L1P55209 391 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TAS2R40P59535 323 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ROM1Q03395 351 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 EFEMP1Q12805 493 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 PIGHQ14442 188 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ACAP1Q15027 740 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TEAD2Q15562 447 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CDO1Q16878 200 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF569Q5MCW4 686 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 C10orf120Q5SQS8 335 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 HECTD3Q5T447 861 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 KLHDC10Q6PID8 442 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CYP4V2Q6ZWL3 525 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 STRADAQ7RTN6 431 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 DAAM2Q86T65 1068 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 NT5DC3Q86UY8 548 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CARFQ8N187 725 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 SLC35F6Q8N357 371 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ARL14EPQ8N8R7 260 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 SYT8Q8NBV8 401 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 LEMD2Q8NC56 503 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 NUDT10Q8NFP7 164 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 RNF139Q8WU17 664 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 FAM172AQ8WUF8 416 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ING5Q8WYH8 240 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 MRPS31Q92665 395 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 GOLGA1Q92805 767 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CD101Q93033 1021 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 E2F7Q96AV8 911 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 PGAP3Q96FM1 320 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 AHCYL2Q96HN2 611 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 GCNAQ96QF7 691 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 WDR24Q96S15 920 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 PEBP4Q96S96 227 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CYP2S1Q96SQ9 504 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TRIM62Q9BVG3 475 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 SLC46A2Q9BY10 475 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ADAM7Q9H2U9 754 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 WDR6Q9NNW5 1121 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 OLA1Q9NTK5 396 aaKnown RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 PIGVQ9NUD9 493 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 DDIT4Q9NX09 232 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 RRN3Q9NYV6 651 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 TRHDEQ9UKU6 1024 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ALG6Q9Y672 507 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 CLUHO75153 1309 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 MYOFQ9NZM1 2061 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SYNJ2BP-COX16A0A087WUM0 186 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TRAV19A0A0A6YYK7 116 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 I6L893 689 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PRRG2O14669 202 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 KIF5CO60282 957 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 FOXD2O60548 495 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 IGLV3-27P01718 113 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CLEC2LP0C7M8 214 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 HDCP19113 662 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 DDX6P26196 483 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 APEX1P27695 318 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 MIPP30301 263 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 RDXP35241 583 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PCK1P35558 622 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 ATP5C1P36542 298 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SLC1A1P43005 524 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 GPR3P46089 330 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CXCR3P49682 368 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SLC7A9P82251 487 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 ZXDBP98169 803 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SLC25A11Q02978 314 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 DEUP1Q05D60 604 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 ITIH3Q06033 890 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 NME3Q13232 169 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CLUL1Q15846 466 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PRAMEF9Q5VWM5 478 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TXNRD3NBQ6F5E7 133 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CXXC5Q7LFL8 322 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SLC41A1Q8IVJ1 513 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 MAB21L3Q8N8X9 362 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SMRP1Q8NCR6 262 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TRIM58Q8NG06 486 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms