RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 INSL5Q9Y5Q6 135 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 TIMP1P01033 207 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 RHOCP08134 193 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 CNPP09543 421 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 NEPROQ6NW34 567 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 POTEHQ6S545 545 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 NAPRTQ6XQN6 538 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 LRRC49Q8IUZ0 686 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 KLHDC8BQ8IXV7 354 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 HDAC10Q969S8 669 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 SCYL1Q96KG9 808 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 PPP1R36Q96LQ0 422 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 POLR1EQ9GZS1 481 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 RC3H2Q9HBD1 1191 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 MRPL17Q9NRX2 175 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 TREX1Q9NSU2 369 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 PNPOQ9NVS9 261 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 COPG2Q9UBF2 871 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 DNAJC16Q9Y2G8 782 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 TRANK1O15050 2925 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 PARNO95453 639 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 ATXN1LP0C7T5 689 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 MZF1P28698 734 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 FAM219BQ5XKK7 198 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 OR13C4Q8NGS5 318 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 OR13J1Q8NGT2 312 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 ACMSDQ8TDX5 336 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 OMDQ99983 421 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 MARCH4Q9P2E8 410 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 RPL26L1Q9UNX3 145 aaKnown RBP11.75□□□□□ -0.53
SHMT2-212ENST00000554467 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 COMMD3-BMI1R4GMX3 469 aa11.75□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 FAM95CA0A1B0GW59 222 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TIMM44O43615 452 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TBL1XO60907 577 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 CPA3P15088 417 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 SLC1A6P48664 564 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 MAPKAPK2P49137 400 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 KPNA1P52294 538 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ALDH18A1P54886 795 aaKnown RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 OXCT1P55809 520 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 VWA5B1Q5TIE3 1220 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RINLQ6ZS11 566 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TEX26Q8N6G2 289 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 PDZD8Q8NEN9 1154 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 WFDC5Q8TCV5 224 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 PTCD3Q96EY7 689 aaKnown RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RHOJQ9H4E5 214 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 PDFQ9HBH1 243 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TLK1Q9UKI8 766 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 FBXO5Q9UKT4 447 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 PCDHGC4Q9Y5F7 938 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 FGF18O76093 207 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 SLC35E2BP0CK96 405 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TAS2R39P59534 338 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RABGAP1LQ5R372 815 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ADGRF1Q5T601 910 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 CRLF3Q8IUI8 442 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 OR6K2Q8NGY2 324 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 NAT14Q8WUY8 206 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 STMN2Q93045 179 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 SLC35B4Q969S0 331 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TBATAQ96M53 351 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 MCMBPQ9BTE3 642 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 NMUR2Q9GZQ4 415 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RUVBL2Q9Y230 463 aaKnown RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 CRYL1Q9Y2S2 319 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 CPQQ9Y646 472 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 A0A0J9YVX5 310 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TGM5O43548 720 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 C1RP00736 705 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RALBP11234 206 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 HDCP19113 662 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 GABRR2P28476 465 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 EPHB3P54753 998 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 RAB33AQ14088 237 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 TSTD2Q5T7W7 516 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 HIC2Q96JB3 615 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 GPR22Q99680 433 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 CINPQ9BW66 212 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-212ENST00000554467 NMRAL1Q9HBL8 299 aa11.74□□□□□ -0.53
SHMT2-212ENST00000554467 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms