RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 JPH3Q8WXH2 748 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-212ENST00000554158 CPA5Q8WXQ8 436 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 KIAA1143Q96AT1 154 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-212ENST00000554158 CATSPER2Q96P56 530 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 RBM15Q96T37 977 aaKnown RBP eCLIP8.21□□□□□ -1.1
ACTN1-212ENST00000554158 B3GNT4Q9C0J1 378 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 CATSPERBQ9H7T0 1116 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 ANKMY1Q9P2S6 941 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 RWDD2AQ9UIY3 292 aa8.21□□□□□ -1.1
ACTN1-212ENST00000554158 NBASA2RRP1 2371 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GOLGA6CA6NDK9 693 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GOLGA6BA6NDN3 693 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 I6L893 689 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 HGSO14964 777 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CASC3O15234 703 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CAPN5O15484 640 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 NUDT21O43809 227 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 LRIG2O94898 1065 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 PIGNO95427 931 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 TPM2P07951 284 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ELFN1P0C7U0 828 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GOLGA6DP0CG33 693 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 PNMA6AP0CW24 399 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CYP11B1P15538 503 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 TIMP2P16035 220 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 EPHB2P29323 1055 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SERPINA4P29622 427 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CDH5P33151 784 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CSTF2P33240 577 aaKnown RBP eCLIP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 LIG3P49916 1009 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 POLE2P56282 527 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 YBEYP58557 167 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 POLR2LP62875 67 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CYP4F2P78329 520 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 APBA1Q02410 837 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ILF3Q12906 894 aaKnown RBP eCLIP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SRSF6Q13247 344 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 KCNAB2Q13303 367 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SEPT6Q14141 434 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 UBAP2LQ14157 1087 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 BECN1Q14457 450 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SYCP1Q15431 976 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 MAN2A1Q16706 1144 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 UGP2Q16851 508 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 WSCD2Q2TBF2 565 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 INO80DQ53TQ3 878 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 C2CD6Q53TS8 623 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 NAA35Q5VZE5 725 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SPECC1LQ69YQ0 1117 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ARCQ7LC44 396 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 FAM71AQ8IYT1 594 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GPR156Q8NFN8 814 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 HCAR2Q8TDS4 363 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 RXFP2Q8WXD0 754 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 PDXPQ96GD0 296 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 AHCYL2Q96HN2 611 aaKnown RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 EXOC2Q96KP1 924 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ZNF641Q96N77 438 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 TAAR9Q96RI9 348 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 EFHD1Q9BUP0 239 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GSDMCQ9BYG8 508 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 WDR26Q9H7D7 661 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ATP13A3Q9H7F0 1226 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 SUDS3Q9H7L9 328 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 CYP4F12Q9HCS2 524 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 PCDH12Q9NPG4 1184 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 GOLGA6AQ9NYA3 693 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 FOXJ2Q9P0K8 574 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 UBA2Q9UBT2 640 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ANAPC2Q9UJX6 822 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 MFHAS1Q9Y4C4 1052 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 DGKBQ9Y6T7 804 aa8.2□□□□□ -1.1
ACTN1-212ENST00000554158 BOD1L1Q8NFC6 3051 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ZNF891A8MT65 544 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 TNFRSF10CO14798 259 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 TEX33O43247 280 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 CREB3O43889 395 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 CD160O95971 181 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 GP1BBP13224 206 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ITGB6P18564 788 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ITIH2P19823 946 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ETV5P41161 510 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 KIAA1024LP59773 190 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ZFP36L1Q07352 338 aaKnown RBP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 SRSF1Q07955 248 aaKnown RBP eCLIP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 NCAPHQ15003 741 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 ACOX1Q15067 660 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 CLPPQ16740 277 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 C15orf59Q2T9L4 293 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-212ENST00000554158 PARP15Q460N3 678 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 SCYL2Q6P3W7 929 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 STRADAQ7RTN6 431 aa8.19□□□□□ -1.1
ACTN1-212ENST00000554158 KDELC2Q7Z4H8 507 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms