RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KIAA1024LP59773 190 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 GABREP78334 506 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SKOR1P84550 965 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TLE3Q04726 772 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 BCL2L1Q07817 233 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 KLHL30Q0D2K2 578 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 RALGDSQ12967 914 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 PIGHQ14442 188 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 NR1I3Q14994 352 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CDKN3Q16667 212 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ALG11Q2TAA5 492 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 DEFB133Q30KQ1 61 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 BOLA3Q53S33 107 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 RALGPS1Q5JS13 557 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC73Q5JTD7 316 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 E4F1Q66K89 784 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 RBM44Q6ZP01 1051 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 DPPA4Q7L190 304 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ZSWIM9Q86XI8 627 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 GKN2Q86XP6 184 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CAMK1DQ8IU85 385 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SPACA3Q8IXA5 215 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SLC35F3Q8IY50 421 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 NPWQ8N729 165 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ARL10Q8N8L6 244 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 NIPA2Q8N8Q9 360 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 NETO2Q8NC67 525 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TSEN2Q8NCE0 465 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 OR6C4Q8NGE1 309 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TEKT4Q8WW24 435 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SCG3Q8WXD2 468 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SYN2Q92777 582 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF653Q96CK0 615 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CELF6Q96J87 481 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 RBM15Q96T37 977 aaKnown RBP eCLIP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 APOOQ9BUR5 198 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CINPQ9BW66 212 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CLPBQ9H078 707 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TCEAL2Q9H3H9 227 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CAAP1Q9H8G2 361 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SP110Q9HB58 689 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ASCL3Q9NQ33 180 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 THSD1Q9NS62 852 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 GPATCH2LQ9NWQ4 482 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CWC15Q9P013 229 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SEPT3Q9UH03 358 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 PCSK1NQ9UHG2 260 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ENTPD2Q9Y5L3 495 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 BZW2Q9Y6E2 419 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CPED1A4D0V7 1026 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 TMX2-CTNND1H3BSU7 103 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 MUSKO15146 869 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 ATXN7O15265 892 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 HTRA2O43464 458 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SERPINC1P01008 464 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 TNFP01375 233 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 MPOP05164 745 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 MYF5P13349 255 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CTSEP14091 401 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 PNLIPP16233 465 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CR2P20023 1033 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 NFKBIAP25963 317 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 TEAD1P28347 426 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SERPINB6P35237 376 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 ARL4AP40617 200 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 UBASH3AP57075 661 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SRP54P61011 504 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 EIF3IQ13347 325 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 C1orf61Q13536 156 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 INPP5AQ14642 412 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 PPP6R3Q5H9R7 873 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 PERM1Q5SV97 790 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SARM1Q6SZW1 724 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 TMCO3Q6UWJ1 677 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LIPIQ6XZB0 460 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 GPR155Q7Z3F1 870 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 POLNQ7Z5Q5 900 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CLEC14AQ86T13 490 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LUZP1Q86V48 1076 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LRRC49Q8IUZ0 686 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 HID1Q8IV36 788 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 WDR36Q8NI36 951 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 PCDH19Q8TAB3 1148 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SNRNP27Q8WVK2 155 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LIN37Q96GY3 246 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CRELD1Q96HD1 420 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 NAP1L5Q96NT1 182 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SLC46A1Q96NT5 459 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 FCRL3Q96P31 734 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 BBC3Q96PG8 261 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 LGMNQ99538 433 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC3Q9BQI4 270 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 MGME1Q9BQP7 344 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms