RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 IL1BP01584 269 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 CYP2A6P11509 494 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 LPOP22079 712 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PRKCHP24723 683 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC8A1P32418 973 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 WASP42768 502 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 KIR2DL1P43626 348 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SUOXP51687 545 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 THOC5Q13769 683 aaKnown RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 ENPP2Q13822 863 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 LRRC32Q14392 662 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 CRYMQ14894 314 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 TAF1AQ15573 450 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 UAP1Q16222 522 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 LONRF1Q17RB8 773 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 HSP90B2PQ58FF3 399 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 TSTD2Q5T7W7 516 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 ERAP2Q6P179 960 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 FBXL19Q6PCT2 694 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 CYS1Q717R9 158 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 TTC7BQ86TV6 843 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 IGDCC3Q8IVU1 814 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SFTPA1Q8IWL2 248 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 IQCKQ8N0W5 287 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SYNPOQ8N3V7 929 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 FBF1Q8TES7 1133 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 STYXQ8WUJ0 223 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PIH1D2Q8WWB5 315 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 ECHDC3Q96DC8 303 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SCRN2Q96FV2 425 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 MTG2Q9H4K7 406 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PRSS16Q9NQE7 514 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 TXNDC16Q9P2K2 825 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 RIMKLBQ9ULI2 386 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 NDRG2Q9UN36 371 aaKnown RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PKP3Q9Y446 797 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 WASF2Q9Y6W5 498 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 SHROOM3Q8TF72 1996 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 A0A0J9YYE9 177 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 TLDC2A0PJX2 215 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 MAP2K7O14733 419 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 STX7O15400 261 aaKnown RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ADH1BP00325 375 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 TRBC1P01850 177 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PIRTP0C851 137 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 MYZAPP0CAP1 466 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CTPS1P17812 591 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 HADHAP40939 763 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 GPX6P59796 221 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PRAMEP78395 509 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 MGAT5Q09328 741 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 NAB1Q13506 487 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CAMK2GQ13555 558 aaPredicted RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ARHGEF7Q14155 803 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 FRG1Q14331 258 aaKnown RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 UGP2Q16851 508 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CEP85LQ5SZL2 805 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 LGSNQ5TDP6 509 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 STEAP4Q687X5 459 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PDPK2PQ6A1A2 396 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF449Q6P9G9 518 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 AGGF1Q8N302 714 aaeCLIP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PIP4K2CQ8TBX8 421 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CALML6Q8TD86 181 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 SPOCK2Q92563 424 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 NSMCE3Q96MG7 304 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ZIM3Q96PE6 472 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ASB2Q96Q27 587 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM129BQ96TA1 746 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ACOX2Q99424 681 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 STMN4Q9H169 189 aaPredicted RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ZFYVE1Q9HBF4 777 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 C20orf96Q9NUD7 363 aaPredicted RBP10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 NSMCE4AQ9NXX6 385 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 ZFATQ9P243 1243 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PPM1HQ9ULR3 514 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CA14Q9ULX7 337 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 PPIL1Q9Y3C6 166 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 CHD5Q8TDI0 1954 aa10.5□□□□□ -0.73
TMEM55B-205ENST00000554028 C1orf232A0A0U1RR37 186 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 TCRBV9S1A1TA0A576 114 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 TSPAN11A1L157 253 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 CCDC78A2IDD5 438 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 MROH6A6NGR9 719 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 CAPN8A6NHC0 703 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 C16orf96A6NNT2 1141 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 UPK3BL1B0FP48 263 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 UPK3BL2E5RIL1 263 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 POC1B-GALNT4F8VUJ3 575 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 STK25O00506 426 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 PFDN6O15212 129 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ATG13O75143 517 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 RNF40O75150 1001 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ALDH1A2O94788 518 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms