RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 WRAP53Q9BUR4 548 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 LRRC61Q9BV99 259 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 FUT8Q9BYC5 575 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 TCEAL2Q9H3H9 227 aaPredicted RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 VIPAS39Q9H9C1 493 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 EPB41L5Q9HCM4 733 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 GULP1Q9UBP9 304 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 ZNF212Q9UDV6 495 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PCDHGA8Q9Y5G5 932 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 SAR1BQ9Y6B6 198 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 BPTFQ12830 3046 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 CCDC187A0A096LP49 1063 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 F8VZ95 297 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 GCATO75600 419 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 TMCC1O94876 653 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 LRIG2O94898 1065 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 CD160O95971 181 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 C6P13671 934 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 UCHL3P15374 230 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 TSHRP16473 764 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 RHOQP17081 205 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 HTR1BP28222 390 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
TDP1-208ENST00000553989 BLKP51451 505 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 RHOAP61586 193 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 NOMO3P69849 1222 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 KIF5AQ12840 1032 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 ELOCQ15369 112 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 MYLK3Q32MK0 819 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 KLHDC7AQ5VTJ3 777 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 MACC1Q6ZN28 852 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 RD3Q7Z3Z2 195 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 KIAA1328Q86T90 577 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 JAMLQ86YT9 394 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 HID1Q8IV36 788 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 PAF1Q8N7H5 531 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 ARL10Q8N8L6 244 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 PCDH19Q8TAB3 1148 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 RXFP2Q8WXD0 754 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 ASB12Q8WXK4 309 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 WBP1Q96G27 269 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 CALR3Q96L12 384 aaKnown RBP8.93□□□□□ -0.98
TDP1-208ENST00000553989 CCDC42Q96M95 316 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 C11orf70Q9BRQ4 267 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 BOCQ9BWV1 1114 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 SEMA4CQ9C0C4 833 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 STRADBQ9C0K7 418 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 MAGEH1Q9H213 219 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 LUC7LQ9NQ29 371 aaKnown RBP8.93□□□□□ -0.98
TDP1-208ENST00000553989 NDFIP2Q9NV92 336 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 TMEM248Q9NWD8 314 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 TMEM59LQ9UK28 342 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 PADI4Q9UM07 663 aa8.93□□□□□ -0.98
TDP1-208ENST00000553989 CXorf51AA0A1B0GTR3 108 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 PMS2P1A4D2B8 440 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 ZSCAN5CA6NGD5 496 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 LMO7DNF2Z398 122 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 PYCARD-AS1I3L0S3 204 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 AGRPO00253 132 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 FANCGO15287 622 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 YY2O15391 372 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 SLC28A2O43868 658 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 LZTS3O60299 673 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 GFPT2O94808 682 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 CELA2BP08218 269 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 ITGA2BP08514 1039 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 PLEKP08567 350 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 ALPIP09923 528 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 ADRA1BP35368 520 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 YPEL5P62699 121 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 ELP6Q0PNE2 266 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 IRF4Q15306 451 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 CCDC14Q49A88 953 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 RAB6CQ53S08 254 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 MIIPQ5JXC2 388 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 BEND6Q5SZJ8 279 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 CCDC122Q5T0U0 273 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 ENPP7Q6UWV6 458 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 PRICKLE2Q7Z3G6 844 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 BNIPLQ7Z465 357 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 NLRP14Q86W24 1093 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 GKN2Q86XP6 184 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 FSTL5Q8N475 847 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 FBXO39Q8N4B4 442 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 RNF10Q8N5U6 811 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 CCDC185Q8N715 623 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 KYQ8NBH2 561 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 NETO2Q8NC67 525 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 LRRN4CLQ8ND94 238 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 FAM172AQ8WUF8 416 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 SLC20A1Q8WUM9 679 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 SYN2Q92777 582 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 COL26A1Q96A83 441 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 CCDC74AQ96AQ1 378 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 CENPTQ96BT3 561 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 EXOC2Q96KP1 924 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms