RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CCT8P50990 548 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 PGGT1BP53609 377 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 CDKL1Q00532 357 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 SPANXN3Q5MJ09 141 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 SDHAF4Q5VUM1 108 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 FAM91A1Q658Y4 838 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 MBLAC2Q68D91 279 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 DCLRE1AQ6PJP8 1040 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 ARHGAP12Q8IWW6 846 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 PLD6Q8N2A8 252 aaKnown RBP9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 EBF4Q9BQW3 602 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 CCDC106Q9BWC9 280 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 LRRC40Q9H9A6 602 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 CDC14AQ9UNH5 594 aa9.09□□□□□ -0.95
AL049839.2-201ENST00000553947 PTPRDP23468 1912 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 A0A1W2PPW3 197 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 H3BNX3 289 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TNFRSF10AO00220 468 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 DFFAO00273 331 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 KPNA4O00629 521 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 IRAK2O43187 625 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 NOL3O60936 208 aaKnown RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PAGE1O75459 146 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SERPINA6P08185 405 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MX2P20592 715 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MSX2P35548 267 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 CPOXP36551 454 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GRIK1P39086 918 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GP5P40197 560 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TM4SF4P48230 202 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 HSPA13P48723 471 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GPR15P49685 360 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 NDST2P52849 883 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PRAMEP78395 509 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GNA12Q03113 381 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 STX3Q13277 289 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 E2F2Q14209 437 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PCLAFQ15004 111 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 DLG2Q15700 870 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TIGD2Q4W5G0 525 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PERM1Q5SV97 790 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TEDDM1Q5T9Z0 273 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 DCLK2Q8N568 766 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SUSD3Q96L08 255 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 CAB39LQ9H9S4 337 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 OSER1Q9NX31 292 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 RNF186Q9NXI6 227 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 BFARQ9NZS9 450 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 APOBEC2Q9Y235 224 aaKnown RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SQORQ9Y6N5 450 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 H6PDO95479 791 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MT-CYBP00156 380 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 NMBRP28336 390 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TYK2P29597 1187 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MAPK10P53779 464 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SREBF2Q12772 1141 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MBTPS1Q14703 1052 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GPR107Q5VW38 600 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 STRA8Q7Z7C7 330 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 RANBP9Q96S59 729 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 RBBP8Q99708 897 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TMEM79Q9BSE2 394 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 OSBPL2Q9H1P3 480 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 MRPL46Q9H2W6 279 aaKnown RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SNX15Q9NRS6 342 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 EPS15L1Q9UBC2 864 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PCDHGA3Q9Y5H0 932 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 PSMD11O00231 422 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GLRA3O75311 464 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 BMXP51813 675 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TRAF2Q12933 501 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SLC39A12Q504Y0 691 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 CLLU1OSQ5K130 101 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 FSTL4Q6MZW2 842 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 UTS2BQ765I0 119 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SETD3Q86TU7 594 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GPR180Q86V85 440 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 KBTBD6Q86V97 674 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SPATA2LQ8IUW3 424 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 C10orf107Q8IVU9 208 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SCML4Q8N228 414 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 FBXW8Q8N3Y1 598 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 GABPB2Q8TAK5 448 aaPredicted RBP9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 ACMSDQ8TDX5 336 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 LINC01599Q8WXQ3 324 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 CPNE1Q99829 537 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 HERC2P3Q9BVR0 1158 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 SLC39A8Q9C0K1 460 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 VPS45Q9NRW7 570 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 NCKIPSDQ9NZQ3 722 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 BCAP29Q9UHQ4 241 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 TRHDEQ9UKU6 1024 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 DSEQ9UL01 958 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 NOD1Q9Y239 953 aa9.08□□□□□ -0.96
AL049839.2-201ENST00000553947 CFLARO15519 480 aa9.07□□□□□ -0.96
AL049839.2-201ENST00000553947 MOCS2O96007 188 aaPredicted RBP9.07□□□□□ -0.96
AL049839.2-201ENST00000553947 ARL1P40616 181 aaPredicted RBP9.07□□□□□ -0.96
AL049839.2-201ENST00000553947 TPTEP56180 551 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms